Gene annotation
Transcriptome id Sobic.006G165650.1
Synonym -
Functional annotation -
UniProt A0A1Z5RE96
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g45980.1 : glycine-rich cell wall protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G157800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Gibberellin receptor GID1L2("PubMedID : 26759170,PubMedID : 24597475")@gibberellin receptor GID1L2, putative, expressed -
2 Sobic.002G040500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.009G206400 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
4 Sobic.007G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@calvin cycle protein CP12, putative, expressed -
5 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
6 Sobic.002G175550 - -
7 Sobic.001G177200 frigida, putative, expressed -
8 Sobic.005G097700 - -
9 Sobic.001G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
10 Sobic.004G186600 cytokinin-O-glucosyltransferase 2, putative, expressed -
11 Sobic.002G256601 - -
12 Sobic.007G070600 purine permease, putative, expressed -
13 Sobic.007G056400 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
14 Sobic.005G008301 - -
15 Sobic.002G002400 Protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.002G410050 - -
17 Sobic.003G423100 NAM, putative, expressed -
18 Sobic.003G325300 NB-ARC/LRR disease resistance protein, putative, expressed -
19 Sobic.004G018500 - -
20 Sobic.007G209500 DNA-binding bromodomain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G165650 Sobic006G165650 Sobic007G157800 Sobic007G157800 Sobic006G165650--Sobic007G157800 Sobic002G040500 Sobic002G040500 Sobic006G165650--Sobic002G040500 Sobic009G206400 Sobic009G206400 Sobic006G165650--Sobic009G206400 Sobic007G207300 Sobic007G207300 Sobic006G165650--Sobic007G207300 Sobic008G175700 Sobic008G175700 Sobic006G165650--Sobic008G175700 Sobic002G175550 Sobic002G175550 Sobic006G165650--Sobic002G175550 Sobic001G177200 Sobic001G177200 Sobic006G165650--Sobic001G177200 Sobic005G097700 Sobic005G097700 Sobic006G165650--Sobic005G097700 Sobic001G256900 Sobic001G256900 Sobic006G165650--Sobic001G256900 Sobic007G157800--Sobic006G165650 Sobic007G157800--Sobic007G207300 Sobic007G070600 Sobic007G070600 Sobic007G157800--Sobic007G070600 Sobic007G157800--Sobic001G256900 Sobic007G157800--Sobic005G097700 Sobic007G157800--Sobic002G175550 Sobic007G157800--Sobic001G177200 Sobic007G157800--Sobic002G040500 Sobic003G336400 Sobic003G336400 Sobic007G157800--Sobic003G336400 Sobic005G208500 Sobic005G208500 Sobic002G040500--Sobic005G208500 Sobic002G040500--Sobic006G165650 Sobic002G002400 Sobic002G002400 Sobic002G040500--Sobic002G002400 Sobic002G040500--Sobic009G206400 Sobic003G325300 Sobic003G325300 Sobic002G040500--Sobic003G325300 Sobic009G070900 Sobic009G070900 Sobic002G040500--Sobic009G070900 Sobic002G040500--Sobic002G175550 Sobic001G378550 Sobic001G378550 Sobic002G040500--Sobic001G378550 Sobic003G423100 Sobic003G423100 Sobic002G040500--Sobic003G423100 Sobic009G206400--Sobic002G040500 Sobic009G206400--Sobic006G165650 Sobic010G060000 Sobic010G060000 Sobic009G206400--Sobic010G060000 Sobic006G074100 Sobic006G074100 Sobic009G206400--Sobic006G074100 Sobic003G437600 Sobic003G437600 Sobic009G206400--Sobic003G437600 Sobic009G206400--Sobic003G325300 Sobic004G187100 Sobic004G187100 Sobic009G206400--Sobic004G187100 Sobic003G382300 Sobic003G382300 Sobic009G206400--Sobic003G382300 Sobic001G077100 Sobic001G077100 Sobic009G206400--Sobic001G077100 Sobic010G258100 Sobic010G258100 Sobic007G207300--Sobic010G258100 Sobic010G095500 Sobic010G095500 Sobic007G207300--Sobic010G095500 Sobic010G158100 Sobic010G158100 Sobic007G207300--Sobic010G158100 Sobic005G232000 Sobic005G232000 Sobic007G207300--Sobic005G232000 Sobic002G326050 Sobic002G326050 Sobic007G207300--Sobic002G326050 Sobic010G158766 Sobic010G158766 Sobic007G207300--Sobic010G158766 Sobic007G131900 Sobic007G131900 Sobic007G207300--Sobic007G131900 Sobic002G140100 Sobic002G140100 Sobic007G207300--Sobic002G140100 Sobic001G139600 Sobic001G139600 Sobic007G207300--Sobic001G139600 Sobic002G429200 Sobic002G429200 Sobic008G175700--Sobic002G429200 Sobic006G242600 Sobic006G242600 Sobic008G175700--Sobic006G242600 Sobic009G221701 Sobic009G221701 Sobic008G175700--Sobic009G221701 Sobic010G149900 Sobic010G149900 Sobic008G175700--Sobic010G149900 Sobic008G175700--Sobic001G177200 Sobic006G116600 Sobic006G116600 Sobic008G175700--Sobic006G116600 Sobic003G396400 Sobic003G396400 Sobic008G175700--Sobic003G396400 Sobic002G410050 Sobic002G410050 Sobic008G175700--Sobic002G410050 Sobic006G153550 Sobic006G153550 Sobic008G175700--Sobic006G153550 Sobic002G175550--Sobic005G097700 Sobic007G210400 Sobic007G210400 Sobic002G175550--Sobic007G210400 Sobic002G004400 Sobic002G004400 Sobic002G175550--Sobic002G004400 Sobic002G175550--Sobic001G378550 Sobic006G090201 Sobic006G090201 Sobic002G175550--Sobic006G090201 Sobic003G221300 Sobic003G221300 Sobic002G175550--Sobic003G221300 Sobic005G037500 Sobic005G037500 Sobic002G175550--Sobic005G037500 Sobic004G330500 Sobic004G330500 Sobic002G175550--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic002G175550--Sobic005G189400 Sobic001G177200--Sobic009G221701 Sobic001G177200--Sobic006G116600 Sobic001G177200--Sobic003G336400 Sobic001G177200--Sobic008G175700 Sobic001G177200--Sobic003G396400 Sobic010G217466 Sobic010G217466 Sobic001G177200--Sobic010G217466 Sobic005G143000 Sobic005G143000 Sobic001G177200--Sobic005G143000 Sobic001G177200--Sobic006G242600 Sobic002G149550 Sobic002G149550 Sobic001G177200--Sobic002G149550 Sobic005G097700--Sobic002G175550 Sobic004G356600 Sobic004G356600 Sobic005G097700--Sobic004G356600 Sobic005G097700--Sobic002G004400 Sobic005G097700--Sobic006G090201 Sobic005G097700--Sobic007G210400 Sobic007G072901 Sobic007G072901 Sobic005G097700--Sobic007G072901 Sobic003G357000 Sobic003G357000 Sobic005G097700--Sobic003G357000 Sobic002G034400 Sobic002G034400 Sobic005G097700--Sobic002G034400 Sobic006G228400 Sobic006G228400 Sobic005G097700--Sobic006G228400 Sobic001G256900--Sobic004G356600 Sobic001G256900--Sobic007G210400 Sobic001G256900--Sobic003G423100 Sobic001G256900--Sobic005G097700 Sobic003G343100 Sobic003G343100 Sobic001G256900--Sobic003G343100 Sobic001G256900--Sobic006G090201 Sobic001G256900--Sobic001G378550 Sobic010G231400 Sobic010G231400 Sobic001G256900--Sobic010G231400 Sobic001G049000 Sobic001G049000 Sobic001G256900--Sobic001G049000
Octagon: transcription factors


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