Gene annotation
Transcriptome id Sobic.001G177200.1
Synonym Sb01g015420, FRL1
Functional annotation frigida, putative, expressed
UniProt C6JS10 , C5WTC4
Pfam PF07899
Panther DB PTHR31791 PTHR31791:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48385 : FRIGIDA-like protein
RAP-DB (Rice) LOC_Os03g39160.1 : frigida, putative, expressed
MaizeGDB (Corn) Zm00025a007153
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G221701 - -
2 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
3 Sobic.003G336400 pentatricopeptide, putative, expressed -
4 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
5 Sobic.003G396400 harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.010G217466 - -
7 Sobic.005G143000 expressed protein -
8 Sobic.006G242600 RIPER9 - Ripening-related family protein precursor, putative, expressed -
9 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
10 Sobic.003G198701 - -
11 Sobic.010G149900 - -
12 Sobic.002G429200 expressed protein -
13 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.002G410050 - -
15 Sobic.005G106800 - -
16 Sobic.003G299400 - -
17 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.005G008301 - -
19 Sobic.001G378150 - -
20 Sobic.007G056400 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D


Gene co-expression network
sample Sobic001G177200 Sobic001G177200 Sobic009G221701 Sobic009G221701 Sobic001G177200--Sobic009G221701 Sobic006G116600 Sobic006G116600 Sobic001G177200--Sobic006G116600 Sobic003G336400 Sobic003G336400 Sobic001G177200--Sobic003G336400 Sobic008G175700 Sobic008G175700 Sobic001G177200--Sobic008G175700 Sobic003G396400 Sobic003G396400 Sobic001G177200--Sobic003G396400 Sobic010G217466 Sobic010G217466 Sobic001G177200--Sobic010G217466 Sobic005G143000 Sobic005G143000 Sobic001G177200--Sobic005G143000 Sobic006G242600 Sobic006G242600 Sobic001G177200--Sobic006G242600 Sobic002G149550 Sobic002G149550 Sobic001G177200--Sobic002G149550 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic002G429200 Sobic002G429200 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic002G285950 Sobic002G285950 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600 Sobic002G411700 Sobic002G411700 Sobic006G116600--Sobic002G411700 Sobic006G116600--Sobic009G221701 Sobic006G116600--Sobic010G217466 Sobic006G116600--Sobic002G149550 Sobic006G116600--Sobic006G242600 Sobic006G116600--Sobic003G336400 Sobic006G116600--Sobic001G177200 Sobic006G116600--Sobic008G175700 Sobic001G378150 Sobic001G378150 Sobic006G116600--Sobic001G378150 Sobic010G258600 Sobic010G258600 Sobic003G336400--Sobic010G258600 Sobic003G336400--Sobic006G116600 Sobic003G336400--Sobic001G378150 Sobic003G398900 Sobic003G398900 Sobic003G336400--Sobic003G398900 Sobic003G336400--Sobic001G177200 Sobic003G013400 Sobic003G013400 Sobic003G336400--Sobic003G013400 Sobic003G336400--Sobic002G149550 Sobic003G336400--Sobic009G221701 Sobic003G336400--Sobic002G429200 Sobic008G175700--Sobic002G429200 Sobic008G175700--Sobic006G242600 Sobic008G175700--Sobic009G221701 Sobic010G149900 Sobic010G149900 Sobic008G175700--Sobic010G149900 Sobic008G175700--Sobic001G177200 Sobic008G175700--Sobic006G116600 Sobic008G175700--Sobic003G396400 Sobic002G410050 Sobic002G410050 Sobic008G175700--Sobic002G410050 Sobic006G153550 Sobic006G153550 Sobic008G175700--Sobic006G153550 Sobic003G396400--Sobic010G149900 Sobic003G396400--Sobic006G242600 Sobic003G396400--Sobic002G410050 Sobic006G214101 Sobic006G214101 Sobic003G396400--Sobic006G214101 Sobic003G396400--Sobic005G106800 Sobic009G165050 Sobic009G165050 Sobic003G396400--Sobic009G165050 Sobic003G396400--Sobic009G221701 Sobic003G396400--Sobic010G217466 Sobic007G056400 Sobic007G056400 Sobic003G396400--Sobic007G056400 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic010G217466--Sobic006G242600 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic005G143000--Sobic001G177200 Sobic005G143000--Sobic006G116600 Sobic005G143000--Sobic008G175700 Sobic005G143000--Sobic001G378150 Sobic002G246950 Sobic002G246950 Sobic005G143000--Sobic002G246950 Sobic005G143000--Sobic003G336400 Sobic003G018400 Sobic003G018400 Sobic005G143000--Sobic003G018400 Sobic005G143000--Sobic009G221701 Sobic005G143000--Sobic010G258600 Sobic006G242600--Sobic003G396400 Sobic006G242600--Sobic009G221701 Sobic006G242600--Sobic010G149900 Sobic006G242600--Sobic010G217466 Sobic006G242600--Sobic006G214101 Sobic006G242600--Sobic005G106800 Sobic006G242600--Sobic002G410050 Sobic006G242600--Sobic002G149550 Sobic006G242600--Sobic002G429200 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic002G149550--Sobic006G242600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic002G149550--Sobic003G396400 Sobic002G149550--Sobic003G336400
Octagon: transcription factors


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