Gene annotation
Transcriptome id Sobic.006G242600.1
Synonym Sb06g030860
Functional annotation RIPER9 - Ripening-related family protein precursor, putative, expressed
UniProt A0A1B6PNN3
Pfam -
Panther DB PTHR33191 PTHR33191:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g42450.1 : RIPER1 - Ripening-related family protein precursor, expressed
MaizeGDB (Corn) Zm00025a009514 , Zm00025a057224 , Zm00025a009513
Brachypodium KQJ97247 , KQK21890 , KQJ97233 , KQK13134
Barley HORVU6Hr1G003460.2 , HORVU6Hr1G003460.1 , HORVU1Hr1G044040.2 , HORVU1Hr1G044040.1
Wheat TraesCS6A02G018800 , TraesCS6A02G332900 , TraesCS1B02G183900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G396400 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.009G221701 - -
3 Sobic.010G149900 - -
4 Sobic.010G217466 - -
5 Sobic.006G214101 - -
6 Sobic.005G106800 - -
7 Sobic.002G410050 - -
8 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
9 Sobic.002G429200 expressed protein -
10 Sobic.002G427201 - -
11 Sobic.007G056400 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
12 Sobic.003G299400 - -
13 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
14 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.002G262500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@osFTL4 FT-Like4 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.009G165050 - -
17 Sobic.003G292800 expressed protein -
18 Sobic.006G153550 - -
19 Sobic.002G426600 expressed protein -
20 Sobic.002G189350 - -


Gene co-expression network
sample Sobic006G242600 Sobic006G242600 Sobic003G396400 Sobic003G396400 Sobic006G242600--Sobic003G396400 Sobic009G221701 Sobic009G221701 Sobic006G242600--Sobic009G221701 Sobic010G149900 Sobic010G149900 Sobic006G242600--Sobic010G149900 Sobic010G217466 Sobic010G217466 Sobic006G242600--Sobic010G217466 Sobic006G214101 Sobic006G214101 Sobic006G242600--Sobic006G214101 Sobic005G106800 Sobic005G106800 Sobic006G242600--Sobic005G106800 Sobic002G410050 Sobic002G410050 Sobic006G242600--Sobic002G410050 Sobic002G149550 Sobic002G149550 Sobic006G242600--Sobic002G149550 Sobic002G429200 Sobic002G429200 Sobic006G242600--Sobic002G429200 Sobic003G396400--Sobic010G149900 Sobic003G396400--Sobic006G242600 Sobic003G396400--Sobic002G410050 Sobic003G396400--Sobic006G214101 Sobic003G396400--Sobic005G106800 Sobic009G165050 Sobic009G165050 Sobic003G396400--Sobic009G165050 Sobic003G396400--Sobic009G221701 Sobic003G396400--Sobic010G217466 Sobic007G056400 Sobic007G056400 Sobic003G396400--Sobic007G056400 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic002G285950 Sobic002G285950 Sobic009G221701--Sobic002G285950 Sobic006G116600 Sobic006G116600 Sobic009G221701--Sobic006G116600 Sobic010G149900--Sobic003G396400 Sobic010G149900--Sobic006G214101 Sobic010G149900--Sobic002G410050 Sobic010G149900--Sobic005G106800 Sobic006G153550 Sobic006G153550 Sobic010G149900--Sobic006G153550 Sobic010G149900--Sobic006G242600 Sobic010G149900--Sobic009G165050 Sobic010G014600 Sobic010G014600 Sobic010G149900--Sobic010G014600 Sobic001G229401 Sobic001G229401 Sobic010G149900--Sobic001G229401 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic010G217466--Sobic006G242600 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G217466--Sobic010G149900 Sobic001G378150 Sobic001G378150 Sobic010G217466--Sobic001G378150 Sobic006G214101--Sobic010G014600 Sobic006G214101--Sobic007G056400 Sobic006G214101--Sobic009G165050 Sobic004G072950 Sobic004G072950 Sobic006G214101--Sobic004G072950 Sobic006G214101--Sobic010G149900 Sobic006G214101--Sobic005G106800 Sobic004G325766 Sobic004G325766 Sobic006G214101--Sobic004G325766 Sobic003G045800 Sobic003G045800 Sobic006G214101--Sobic003G045800 Sobic002G004400 Sobic002G004400 Sobic006G214101--Sobic002G004400 Sobic005G106800--Sobic003G299400 Sobic005G106800--Sobic009G165050 Sobic004G351866 Sobic004G351866 Sobic005G106800--Sobic004G351866 Sobic005G106800--Sobic004G325766 Sobic003G357000 Sobic003G357000 Sobic005G106800--Sobic003G357000 Sobic005G106800--Sobic003G045800 Sobic010G275550 Sobic010G275550 Sobic005G106800--Sobic010G275550 Sobic005G106800--Sobic010G014600 Sobic005G106800--Sobic006G214101 Sobic002G410050--Sobic009G165050 Sobic002G410050--Sobic005G106800 Sobic002G410050--Sobic003G299400 Sobic002G410050--Sobic006G214101 Sobic002G410050--Sobic010G149900 Sobic002G410050--Sobic004G351866 Sobic002G410050--Sobic010G014600 Sobic002G410050--Sobic003G396400 Sobic002G410050--Sobic003G045800 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic002G149550--Sobic006G242600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic002G149550--Sobic003G396400 Sobic003G336400 Sobic003G336400 Sobic002G149550--Sobic003G336400 Sobic002G375600 Sobic002G375600 Sobic002G429200--Sobic002G375600 Sobic003G292800 Sobic003G292800 Sobic002G429200--Sobic003G292800 Sobic002G429200--Sobic009G221701 Sobic005G230600 Sobic005G230600 Sobic002G429200--Sobic005G230600 Sobic002G189350 Sobic002G189350 Sobic002G429200--Sobic002G189350 Sobic002G429200--Sobic010G217466 Sobic002G429200--Sobic006G242600 Sobic008G175700 Sobic008G175700 Sobic002G429200--Sobic008G175700 Sobic003G013400 Sobic003G013400 Sobic002G429200--Sobic003G013400
Octagon: transcription factors


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