Gene annotation
Transcriptome id Sobic.002G149550.1
Synonym -
Functional annotation -
UniProt Q09EM3 , A0A1W0W458
Pfam PF00361
Panther DB PTHR22773 PTHR22773:SF89
NCBI CDD -
KEGG Orthology K03879; NADH-ubiquinone oxidoreductase chain 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATMG01320 : NADH dehydrogenase 2B
RAP-DB (Rice) LOC_Os04g16742.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G038830.1 , HORVU7Hr1G058370.1 , HORVU5Hr1G072340.1
Wheat TraesCS6B02G232200 , TraesCS3D02G520700 , TraesCS5B02G098400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G221701 - -
2 Sobic.010G217466 - -
3 Sobic.002G285950 - -
4 Sobic.006G242600 RIPER9 - Ripening-related family protein precursor, putative, expressed -
5 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.001G378150 - -
7 Sobic.002G429200 expressed protein -
8 Sobic.003G396400 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.003G336400 pentatricopeptide, putative, expressed -
10 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.005G106800 - -
12 Sobic.003G013400 S-locus lectin protein kinase family protein, putative, expressed -
13 Sobic.010G149900 - -
14 Sobic.010G173550 - -
15 Sobic.003G299400 - -
16 Sobic.001G177200 frigida, putative, expressed -
17 Sobic.002G410050 - -
18 Sobic.002G246950 - -
19 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
20 Sobic.002G264700 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G149550 Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic002G149550--Sobic009G221701 Sobic010G217466 Sobic010G217466 Sobic002G149550--Sobic010G217466 Sobic002G285950 Sobic002G285950 Sobic002G149550--Sobic002G285950 Sobic006G242600 Sobic006G242600 Sobic002G149550--Sobic006G242600 Sobic006G116600 Sobic006G116600 Sobic002G149550--Sobic006G116600 Sobic001G378150 Sobic001G378150 Sobic002G149550--Sobic001G378150 Sobic002G429200 Sobic002G429200 Sobic002G149550--Sobic002G429200 Sobic003G396400 Sobic003G396400 Sobic002G149550--Sobic003G396400 Sobic003G336400 Sobic003G336400 Sobic002G149550--Sobic003G336400 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic010G217466--Sobic006G242600 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic002G285950--Sobic001G378150 Sobic002G285950--Sobic002G149550 Sobic002G285950--Sobic009G221701 Sobic002G285950--Sobic010G217466 Sobic002G331700 Sobic002G331700 Sobic002G285950--Sobic002G331700 Sobic007G119300 Sobic007G119300 Sobic002G285950--Sobic007G119300 Sobic002G426650 Sobic002G426650 Sobic002G285950--Sobic002G426650 Sobic007G212700 Sobic007G212700 Sobic002G285950--Sobic007G212700 Sobic006G208600 Sobic006G208600 Sobic002G285950--Sobic006G208600 Sobic006G242600--Sobic003G396400 Sobic006G242600--Sobic009G221701 Sobic006G242600--Sobic010G149900 Sobic006G242600--Sobic010G217466 Sobic006G214101 Sobic006G214101 Sobic006G242600--Sobic006G214101 Sobic006G242600--Sobic005G106800 Sobic002G410050 Sobic002G410050 Sobic006G242600--Sobic002G410050 Sobic006G242600--Sobic002G149550 Sobic006G242600--Sobic002G429200 Sobic002G411700 Sobic002G411700 Sobic006G116600--Sobic002G411700 Sobic006G116600--Sobic009G221701 Sobic006G116600--Sobic010G217466 Sobic006G116600--Sobic002G149550 Sobic006G116600--Sobic006G242600 Sobic006G116600--Sobic003G336400 Sobic001G177200 Sobic001G177200 Sobic006G116600--Sobic001G177200 Sobic008G175700 Sobic008G175700 Sobic006G116600--Sobic008G175700 Sobic006G116600--Sobic001G378150 Sobic001G378150--Sobic002G285950 Sobic001G378150--Sobic007G119300 Sobic001G378150--Sobic010G217466 Sobic001G378150--Sobic009G221701 Sobic001G378150--Sobic002G429200 Sobic001G378150--Sobic002G149550 Sobic002G246950 Sobic002G246950 Sobic001G378150--Sobic002G246950 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic002G375600 Sobic002G375600 Sobic002G429200--Sobic002G375600 Sobic003G292800 Sobic003G292800 Sobic002G429200--Sobic003G292800 Sobic002G429200--Sobic009G221701 Sobic005G230600 Sobic005G230600 Sobic002G429200--Sobic005G230600 Sobic002G189350 Sobic002G189350 Sobic002G429200--Sobic002G189350 Sobic002G429200--Sobic010G217466 Sobic002G429200--Sobic006G242600 Sobic002G429200--Sobic008G175700 Sobic003G013400 Sobic003G013400 Sobic002G429200--Sobic003G013400 Sobic003G396400--Sobic010G149900 Sobic003G396400--Sobic006G242600 Sobic003G396400--Sobic002G410050 Sobic003G396400--Sobic006G214101 Sobic003G396400--Sobic005G106800 Sobic009G165050 Sobic009G165050 Sobic003G396400--Sobic009G165050 Sobic003G396400--Sobic009G221701 Sobic003G396400--Sobic010G217466 Sobic007G056400 Sobic007G056400 Sobic003G396400--Sobic007G056400 Sobic010G258600 Sobic010G258600 Sobic003G336400--Sobic010G258600 Sobic003G336400--Sobic006G116600 Sobic003G336400--Sobic001G378150 Sobic003G398900 Sobic003G398900 Sobic003G336400--Sobic003G398900 Sobic003G336400--Sobic001G177200 Sobic003G336400--Sobic003G013400 Sobic003G336400--Sobic002G149550 Sobic003G336400--Sobic009G221701 Sobic003G336400--Sobic002G429200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.