Gene annotation
Transcriptome id Sobic.001G378150.1
Synonym -
Functional annotation -
UniProt A0A1Z5S9M1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G285950 - -
2 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
3 Sobic.010G217466 - -
4 Sobic.009G221701 - -
5 Sobic.002G429200 expressed protein -
6 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
7 Sobic.002G246950 - -
8 Sobic.003G336400 pentatricopeptide, putative, expressed -
9 Sobic.003G224000 - -
10 Sobic.007G070600 purine permease, putative, expressed -
11 Sobic.003G013400 S-locus lectin protein kinase family protein, putative, expressed -
12 Sobic.002G426650 - -
13 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
14 Sobic.001G460150 - -
15 Sobic.002G331700 expressed protein -
16 Sobic.002G264700 RNA recognition motif containing protein, putative, expressed -
17 Sobic.008G112400 - -
18 Sobic.006G208600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein disulfide isomerase, putative, expressed K17609: nucleoredoxin
19 Sobic.006G065200 SAM domain family protein, expressed -
20 Sobic.010G005401 - -


Gene co-expression network
sample Sobic001G378150 Sobic001G378150 Sobic002G285950 Sobic002G285950 Sobic001G378150--Sobic002G285950 Sobic007G119300 Sobic007G119300 Sobic001G378150--Sobic007G119300 Sobic010G217466 Sobic010G217466 Sobic001G378150--Sobic010G217466 Sobic009G221701 Sobic009G221701 Sobic001G378150--Sobic009G221701 Sobic002G429200 Sobic002G429200 Sobic001G378150--Sobic002G429200 Sobic002G149550 Sobic002G149550 Sobic001G378150--Sobic002G149550 Sobic002G246950 Sobic002G246950 Sobic001G378150--Sobic002G246950 Sobic003G336400 Sobic003G336400 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic002G285950--Sobic001G378150 Sobic002G285950--Sobic002G149550 Sobic002G285950--Sobic009G221701 Sobic002G285950--Sobic010G217466 Sobic002G331700 Sobic002G331700 Sobic002G285950--Sobic002G331700 Sobic002G285950--Sobic007G119300 Sobic002G426650 Sobic002G426650 Sobic002G285950--Sobic002G426650 Sobic007G212700 Sobic007G212700 Sobic002G285950--Sobic007G212700 Sobic006G208600 Sobic006G208600 Sobic002G285950--Sobic006G208600 Sobic007G119300--Sobic002G426650 Sobic008G112400 Sobic008G112400 Sobic007G119300--Sobic008G112400 Sobic005G001600 Sobic005G001600 Sobic007G119300--Sobic005G001600 Sobic002G065300 Sobic002G065300 Sobic007G119300--Sobic002G065300 Sobic006G280900 Sobic006G280900 Sobic007G119300--Sobic006G280900 Sobic004G302400 Sobic004G302400 Sobic007G119300--Sobic004G302400 Sobic006G222650 Sobic006G222650 Sobic007G119300--Sobic006G222650 Sobic009G174600 Sobic009G174600 Sobic007G119300--Sobic009G174600 Sobic004G302550 Sobic004G302550 Sobic007G119300--Sobic004G302550 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic006G242600 Sobic006G242600 Sobic010G217466--Sobic006G242600 Sobic003G396400 Sobic003G396400 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic006G116600 Sobic006G116600 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600 Sobic002G375600 Sobic002G375600 Sobic002G429200--Sobic002G375600 Sobic003G292800 Sobic003G292800 Sobic002G429200--Sobic003G292800 Sobic002G429200--Sobic009G221701 Sobic005G230600 Sobic005G230600 Sobic002G429200--Sobic005G230600 Sobic002G189350 Sobic002G189350 Sobic002G429200--Sobic002G189350 Sobic002G429200--Sobic010G217466 Sobic002G429200--Sobic006G242600 Sobic008G175700 Sobic008G175700 Sobic002G429200--Sobic008G175700 Sobic003G013400 Sobic003G013400 Sobic002G429200--Sobic003G013400 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic002G149550--Sobic006G242600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic002G149550--Sobic003G396400 Sobic002G149550--Sobic003G336400 Sobic002G060750 Sobic002G060750 Sobic002G246950--Sobic002G060750 Sobic003G398900 Sobic003G398900 Sobic002G246950--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic002G246950--Sobic003G018400 Sobic003G303800 Sobic003G303800 Sobic002G246950--Sobic003G303800 Sobic002G246950--Sobic001G378150 Sobic002G411700 Sobic002G411700 Sobic002G246950--Sobic002G411700 Sobic002G246950--Sobic002G285950 Sobic002G246950--Sobic002G149550 Sobic007G094000 Sobic007G094000 Sobic002G246950--Sobic007G094000 Sobic010G258600 Sobic010G258600 Sobic003G336400--Sobic010G258600 Sobic003G336400--Sobic006G116600 Sobic003G336400--Sobic001G378150 Sobic003G336400--Sobic003G398900 Sobic001G177200 Sobic001G177200 Sobic003G336400--Sobic001G177200 Sobic003G336400--Sobic003G013400 Sobic003G336400--Sobic002G149550 Sobic003G336400--Sobic009G221701 Sobic003G336400--Sobic002G429200 Sobic001G535601 Sobic001G535601 Sobic003G224000--Sobic001G535601 Sobic002G218200 Sobic002G218200 Sobic003G224000--Sobic002G218200 Sobic007G070600 Sobic007G070600 Sobic003G224000--Sobic007G070600 Sobic001G410800 Sobic001G410800 Sobic003G224000--Sobic001G410800 Sobic010G005401 Sobic010G005401 Sobic003G224000--Sobic010G005401 Sobic006G065200 Sobic006G065200 Sobic003G224000--Sobic006G065200 Sobic010G136601 Sobic010G136601 Sobic003G224000--Sobic010G136601 Sobic001G300750 Sobic001G300750 Sobic003G224000--Sobic001G300750 Sobic001G543600 Sobic001G543600 Sobic003G224000--Sobic001G543600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.