Gene annotation
Transcriptome id Sobic.006G208600.1
Synonym Sb06g027950
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
protein disulfide isomerase, putative, expressed
UniProt C5YFK6
Pfam PF07649 PF13905
Panther DB PTHR13871 PTHR13871:SF38
NCBI CDD KOG2501; Thioredoxin, nucleoredoxin and related proteins
KEGG Orthology K17609; nucleoredoxin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31240 : protein kinase C-like zinc finger protein
RAP-DB (Rice) LOC_Os04g51920.1 : protein disulfide isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a056983
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G285950 - -
2 Sobic.003G298000 - -
3 Sobic.001G378150 - -
4 Sobic.002G346250 - -
5 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
6 Sobic.001G460150 - -
7 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
8 Sobic.002G312600 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.001G494400 DUF593 domain containing protein, expressed -
10 Sobic.002G013600 expressed protein -
11 Sobic.004G258450 - -
12 Sobic.009G049100 - -
13 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
14 Sobic.004G223350 - -
15 Sobic.009G170301 - -
16 Sobic.009G082500 - -
17 Sobic.002G038200 deoxyribonuclease tatD, putative, expressed K03424: TatD DNase family protein
18 Sobic.003G013400 S-locus lectin protein kinase family protein, putative, expressed -
19 Sobic.008G112400 - -
20 Sobic.010G041500 dual specificity protein phosphatase, putative, expressed -


Gene co-expression network
sample Sobic006G208600 Sobic006G208600 Sobic002G285950 Sobic002G285950 Sobic006G208600--Sobic002G285950 Sobic003G298000 Sobic003G298000 Sobic006G208600--Sobic003G298000 Sobic001G378150 Sobic001G378150 Sobic006G208600--Sobic001G378150 Sobic002G346250 Sobic002G346250 Sobic006G208600--Sobic002G346250 Sobic007G119300 Sobic007G119300 Sobic006G208600--Sobic007G119300 Sobic001G460150 Sobic001G460150 Sobic006G208600--Sobic001G460150 Sobic004G190800 Sobic004G190800 Sobic006G208600--Sobic004G190800 Sobic002G312600 Sobic002G312600 Sobic006G208600--Sobic002G312600 Sobic001G494400 Sobic001G494400 Sobic006G208600--Sobic001G494400 Sobic002G285950--Sobic001G378150 Sobic002G149550 Sobic002G149550 Sobic002G285950--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic002G285950--Sobic009G221701 Sobic010G217466 Sobic010G217466 Sobic002G285950--Sobic010G217466 Sobic002G331700 Sobic002G331700 Sobic002G285950--Sobic002G331700 Sobic002G285950--Sobic007G119300 Sobic002G426650 Sobic002G426650 Sobic002G285950--Sobic002G426650 Sobic007G212700 Sobic007G212700 Sobic002G285950--Sobic007G212700 Sobic002G285950--Sobic006G208600 Sobic009G252500 Sobic009G252500 Sobic003G298000--Sobic009G252500 Sobic003G298000--Sobic001G494400 Sobic007G046600 Sobic007G046600 Sobic003G298000--Sobic007G046600 Sobic002G209450 Sobic002G209450 Sobic003G298000--Sobic002G209450 Sobic001G010900 Sobic001G010900 Sobic003G298000--Sobic001G010900 Sobic009G049100 Sobic009G049100 Sobic003G298000--Sobic009G049100 Sobic004G144300 Sobic004G144300 Sobic003G298000--Sobic004G144300 Sobic004G310400 Sobic004G310400 Sobic003G298000--Sobic004G310400 Sobic001G520000 Sobic001G520000 Sobic003G298000--Sobic001G520000 Sobic001G378150--Sobic002G285950 Sobic001G378150--Sobic007G119300 Sobic001G378150--Sobic010G217466 Sobic001G378150--Sobic009G221701 Sobic002G429200 Sobic002G429200 Sobic001G378150--Sobic002G429200 Sobic001G378150--Sobic002G149550 Sobic002G246950 Sobic002G246950 Sobic001G378150--Sobic002G246950 Sobic003G336400 Sobic003G336400 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic005G001600 Sobic005G001600 Sobic002G346250--Sobic005G001600 Sobic008G112400 Sobic008G112400 Sobic002G346250--Sobic008G112400 Sobic003G155350 Sobic003G155350 Sobic002G346250--Sobic003G155350 Sobic009G082500 Sobic009G082500 Sobic002G346250--Sobic009G082500 Sobic002G013600 Sobic002G013600 Sobic002G346250--Sobic002G013600 Sobic004G184500 Sobic004G184500 Sobic002G346250--Sobic004G184500 Sobic003G043650 Sobic003G043650 Sobic002G346250--Sobic003G043650 Sobic004G288900 Sobic004G288900 Sobic002G346250--Sobic004G288900 Sobic004G223350 Sobic004G223350 Sobic002G346250--Sobic004G223350 Sobic007G119300--Sobic002G426650 Sobic007G119300--Sobic008G112400 Sobic007G119300--Sobic005G001600 Sobic002G065300 Sobic002G065300 Sobic007G119300--Sobic002G065300 Sobic006G280900 Sobic006G280900 Sobic007G119300--Sobic006G280900 Sobic004G302400 Sobic004G302400 Sobic007G119300--Sobic004G302400 Sobic006G222650 Sobic006G222650 Sobic007G119300--Sobic006G222650 Sobic009G174600 Sobic009G174600 Sobic007G119300--Sobic009G174600 Sobic004G302550 Sobic004G302550 Sobic007G119300--Sobic004G302550 Sobic001G460150--Sobic009G049100 Sobic008G024700 Sobic008G024700 Sobic001G460150--Sobic008G024700 Sobic004G258450 Sobic004G258450 Sobic001G460150--Sobic004G258450 Sobic003G336300 Sobic003G336300 Sobic001G460150--Sobic003G336300 Sobic010G084900 Sobic010G084900 Sobic001G460150--Sobic010G084900 Sobic001G460150--Sobic004G190800 Sobic001G460150--Sobic004G144300 Sobic001G460150--Sobic007G046600 Sobic001G460150--Sobic003G298000 Sobic004G190800--Sobic002G013600 Sobic001G312801 Sobic001G312801 Sobic004G190800--Sobic001G312801 Sobic004G190800--Sobic009G049100 Sobic002G360701 Sobic002G360701 Sobic004G190800--Sobic002G360701 Sobic007G061500 Sobic007G061500 Sobic004G190800--Sobic007G061500 Sobic001G350800 Sobic001G350800 Sobic004G190800--Sobic001G350800 Sobic004G314100 Sobic004G314100 Sobic004G190800--Sobic004G314100 Sobic004G190800--Sobic004G288900 Sobic004G190800--Sobic002G346250 Sobic004G102301 Sobic004G102301 Sobic002G312600--Sobic004G102301 Sobic009G170301 Sobic009G170301 Sobic002G312600--Sobic009G170301 Sobic001G204200 Sobic001G204200 Sobic002G312600--Sobic001G204200 Sobic005G094500 Sobic005G094500 Sobic002G312600--Sobic005G094500 Sobic002G076932 Sobic002G076932 Sobic002G312600--Sobic002G076932 Sobic009G235100 Sobic009G235100 Sobic002G312600--Sobic009G235100 Sobic001G206800 Sobic001G206800 Sobic002G312600--Sobic001G206800 Sobic006G093400 Sobic006G093400 Sobic002G312600--Sobic006G093400 Sobic002G312600--Sobic003G155350 Sobic001G494400--Sobic003G298000 Sobic003G139100 Sobic003G139100 Sobic001G494400--Sobic003G139100 Sobic001G494400--Sobic002G013600 Sobic001G494400--Sobic002G209450 Sobic005G096201 Sobic005G096201 Sobic001G494400--Sobic005G096201 Sobic001G494400--Sobic001G010900 Sobic002G038200 Sobic002G038200 Sobic001G494400--Sobic002G038200 Sobic001G494400--Sobic007G061500 Sobic001G341900 Sobic001G341900 Sobic001G494400--Sobic001G341900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.