Gene annotation
Transcriptome id Sobic.002G285950.1
Synonym -
Functional annotation -
UniProt A0A1W0W664
Pfam PF02519
Panther DB PTHR31175 PTHR31175:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29500 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37470.1 : OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a014500 , Zm00025a014499 , Zm00025a014498 , Zm00025a014496
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378150 - -
2 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
3 Sobic.009G221701 - -
4 Sobic.010G217466 - -
5 Sobic.002G331700 expressed protein -
6 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
7 Sobic.002G426650 - -
8 Sobic.007G212700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
9 Sobic.006G208600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein disulfide isomerase, putative, expressed K17609: nucleoredoxin
10 Sobic.007G070600 purine permease, putative, expressed -
11 Sobic.002G246950 - -
12 Sobic.008G112400 - -
13 Sobic.003G013400 S-locus lectin protein kinase family protein, putative, expressed -
14 Sobic.002G312600 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.002G429200 expressed protein -
16 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.007G044350 - -
18 Sobic.002G008701 - -
19 Sobic.002G065300 OsSub58 - Putative Subtilisin homologue, expressed -
20 Sobic.005G027032 - -


Gene co-expression network
sample Sobic002G285950 Sobic002G285950 Sobic001G378150 Sobic001G378150 Sobic002G285950--Sobic001G378150 Sobic002G149550 Sobic002G149550 Sobic002G285950--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic002G285950--Sobic009G221701 Sobic010G217466 Sobic010G217466 Sobic002G285950--Sobic010G217466 Sobic002G331700 Sobic002G331700 Sobic002G285950--Sobic002G331700 Sobic007G119300 Sobic007G119300 Sobic002G285950--Sobic007G119300 Sobic002G426650 Sobic002G426650 Sobic002G285950--Sobic002G426650 Sobic007G212700 Sobic007G212700 Sobic002G285950--Sobic007G212700 Sobic006G208600 Sobic006G208600 Sobic002G285950--Sobic006G208600 Sobic001G378150--Sobic002G285950 Sobic001G378150--Sobic007G119300 Sobic001G378150--Sobic010G217466 Sobic001G378150--Sobic009G221701 Sobic002G429200 Sobic002G429200 Sobic001G378150--Sobic002G429200 Sobic001G378150--Sobic002G149550 Sobic002G246950 Sobic002G246950 Sobic001G378150--Sobic002G246950 Sobic003G336400 Sobic003G336400 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic006G242600 Sobic006G242600 Sobic002G149550--Sobic006G242600 Sobic006G116600 Sobic006G116600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic003G396400 Sobic003G396400 Sobic002G149550--Sobic003G396400 Sobic002G149550--Sobic003G336400 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic010G217466--Sobic006G242600 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic002G331700--Sobic002G426650 Sobic008G112400 Sobic008G112400 Sobic002G331700--Sobic008G112400 Sobic002G331700--Sobic007G119300 Sobic002G065300 Sobic002G065300 Sobic002G331700--Sobic002G065300 Sobic003G233300 Sobic003G233300 Sobic002G331700--Sobic003G233300 Sobic002G331700--Sobic002G285950 Sobic004G302550 Sobic004G302550 Sobic002G331700--Sobic004G302550 Sobic008G064900 Sobic008G064900 Sobic002G331700--Sobic008G064900 Sobic007G016300 Sobic007G016300 Sobic002G331700--Sobic007G016300 Sobic007G119300--Sobic002G426650 Sobic007G119300--Sobic008G112400 Sobic005G001600 Sobic005G001600 Sobic007G119300--Sobic005G001600 Sobic007G119300--Sobic002G065300 Sobic006G280900 Sobic006G280900 Sobic007G119300--Sobic006G280900 Sobic004G302400 Sobic004G302400 Sobic007G119300--Sobic004G302400 Sobic006G222650 Sobic006G222650 Sobic007G119300--Sobic006G222650 Sobic009G174600 Sobic009G174600 Sobic007G119300--Sobic009G174600 Sobic007G119300--Sobic004G302550 Sobic002G426650--Sobic008G112400 Sobic002G426650--Sobic007G119300 Sobic002G426650--Sobic004G302550 Sobic004G269500 Sobic004G269500 Sobic002G426650--Sobic004G269500 Sobic002G426650--Sobic002G065300 Sobic002G426650--Sobic009G174600 Sobic002G426650--Sobic008G064900 Sobic002G426650--Sobic005G001600 Sobic002G426650--Sobic004G302400 Sobic008G175600 Sobic008G175600 Sobic007G212700--Sobic008G175600 Sobic007G212700--Sobic004G269500 Sobic002G312600 Sobic002G312600 Sobic007G212700--Sobic002G312600 Sobic007G212700--Sobic002G285950 Sobic008G054400 Sobic008G054400 Sobic007G212700--Sobic008G054400 Sobic002G008701 Sobic002G008701 Sobic007G212700--Sobic002G008701 Sobic002G030001 Sobic002G030001 Sobic007G212700--Sobic002G030001 Sobic007G212700--Sobic002G426650 Sobic007G212700--Sobic002G065300 Sobic006G208600--Sobic002G285950 Sobic003G298000 Sobic003G298000 Sobic006G208600--Sobic003G298000 Sobic006G208600--Sobic001G378150 Sobic002G346250 Sobic002G346250 Sobic006G208600--Sobic002G346250 Sobic006G208600--Sobic007G119300 Sobic001G460150 Sobic001G460150 Sobic006G208600--Sobic001G460150 Sobic004G190800 Sobic004G190800 Sobic006G208600--Sobic004G190800 Sobic006G208600--Sobic002G312600 Sobic001G494400 Sobic001G494400 Sobic006G208600--Sobic001G494400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.