Gene annotation
Transcriptome id Sobic.003G013400.1
Synonym Sb03g001330
Functional annotation S-locus lectin protein kinase family protein, putative, expressed
UniProt C5XKC4
Pfam PF00954 PF08276 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF141
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G19130 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os01g12290.1 : S-locus lectin protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022867 , Zm00025a022858
Brachypodium KQK03355
Barley HORVU6Hr1G013750.1 , HORVU6Hr1G013750.2
Wheat TraesCS6A02G078700 , TraesCS3B02G174800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G429200 expressed protein -
2 Sobic.009G221701 - -
3 Sobic.001G378150 - -
4 Sobic.003G336400 pentatricopeptide, putative, expressed -
5 Sobic.007G070600 purine permease, putative, expressed -
6 Sobic.010G217466 - -
7 Sobic.008G175700 RING-H2 finger protein ATL5D, putative, expressed -
8 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
9 Sobic.002G285950 - -
10 Sobic.003G192801 - -
11 Sobic.005G230600 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.005G106800 - -
13 Sobic.010G173550 - -
14 Sobic.006G242600 RIPER9 - Ripening-related family protein precursor, putative, expressed -
15 Sobic.005G008301 - -
16 Sobic.003G292800 expressed protein -
17 Sobic.001G060666 - -
18 Sobic.003G299400 - -
19 Sobic.004G325766 - -
20 Sobic.003G198701 - -


Gene co-expression network
sample Sobic003G013400 Sobic003G013400 Sobic002G429200 Sobic002G429200 Sobic003G013400--Sobic002G429200 Sobic009G221701 Sobic009G221701 Sobic003G013400--Sobic009G221701 Sobic001G378150 Sobic001G378150 Sobic003G013400--Sobic001G378150 Sobic003G336400 Sobic003G336400 Sobic003G013400--Sobic003G336400 Sobic007G070600 Sobic007G070600 Sobic003G013400--Sobic007G070600 Sobic010G217466 Sobic010G217466 Sobic003G013400--Sobic010G217466 Sobic008G175700 Sobic008G175700 Sobic003G013400--Sobic008G175700 Sobic002G149550 Sobic002G149550 Sobic003G013400--Sobic002G149550 Sobic002G285950 Sobic002G285950 Sobic003G013400--Sobic002G285950 Sobic002G375600 Sobic002G375600 Sobic002G429200--Sobic002G375600 Sobic003G292800 Sobic003G292800 Sobic002G429200--Sobic003G292800 Sobic002G429200--Sobic009G221701 Sobic005G230600 Sobic005G230600 Sobic002G429200--Sobic005G230600 Sobic002G189350 Sobic002G189350 Sobic002G429200--Sobic002G189350 Sobic002G429200--Sobic010G217466 Sobic006G242600 Sobic006G242600 Sobic002G429200--Sobic006G242600 Sobic002G429200--Sobic008G175700 Sobic002G429200--Sobic003G013400 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic003G396400 Sobic003G396400 Sobic009G221701--Sobic003G396400 Sobic005G106800 Sobic005G106800 Sobic009G221701--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic006G116600 Sobic006G116600 Sobic009G221701--Sobic006G116600 Sobic001G378150--Sobic002G285950 Sobic007G119300 Sobic007G119300 Sobic001G378150--Sobic007G119300 Sobic001G378150--Sobic010G217466 Sobic001G378150--Sobic009G221701 Sobic001G378150--Sobic002G429200 Sobic001G378150--Sobic002G149550 Sobic002G246950 Sobic002G246950 Sobic001G378150--Sobic002G246950 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic010G258600 Sobic010G258600 Sobic003G336400--Sobic010G258600 Sobic003G336400--Sobic006G116600 Sobic003G336400--Sobic001G378150 Sobic003G398900 Sobic003G398900 Sobic003G336400--Sobic003G398900 Sobic001G177200 Sobic001G177200 Sobic003G336400--Sobic001G177200 Sobic003G336400--Sobic003G013400 Sobic003G336400--Sobic002G149550 Sobic003G336400--Sobic009G221701 Sobic003G336400--Sobic002G429200 Sobic007G070600--Sobic003G224000 Sobic001G535601 Sobic001G535601 Sobic007G070600--Sobic001G535601 Sobic007G070600--Sobic001G378150 Sobic005G008301 Sobic005G008301 Sobic007G070600--Sobic005G008301 Sobic001G062400 Sobic001G062400 Sobic007G070600--Sobic001G062400 Sobic007G070600--Sobic003G013400 Sobic005G232200 Sobic005G232200 Sobic007G070600--Sobic005G232200 Sobic002G218200 Sobic002G218200 Sobic007G070600--Sobic002G218200 Sobic001G139600 Sobic001G139600 Sobic007G070600--Sobic001G139600 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic010G217466--Sobic006G242600 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic008G175700--Sobic002G429200 Sobic008G175700--Sobic006G242600 Sobic008G175700--Sobic009G221701 Sobic008G175700--Sobic010G149900 Sobic008G175700--Sobic001G177200 Sobic008G175700--Sobic006G116600 Sobic008G175700--Sobic003G396400 Sobic002G410050 Sobic002G410050 Sobic008G175700--Sobic002G410050 Sobic006G153550 Sobic006G153550 Sobic008G175700--Sobic006G153550 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic002G149550--Sobic006G242600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic002G149550--Sobic003G396400 Sobic002G149550--Sobic003G336400 Sobic002G285950--Sobic001G378150 Sobic002G285950--Sobic002G149550 Sobic002G285950--Sobic009G221701 Sobic002G285950--Sobic010G217466 Sobic002G331700 Sobic002G331700 Sobic002G285950--Sobic002G331700 Sobic002G285950--Sobic007G119300 Sobic002G426650 Sobic002G426650 Sobic002G285950--Sobic002G426650 Sobic007G212700 Sobic007G212700 Sobic002G285950--Sobic007G212700 Sobic006G208600 Sobic006G208600 Sobic002G285950--Sobic006G208600
Octagon: transcription factors


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