Gene annotation
Transcriptome id Sobic.010G041500.3,Sobic.010G041500.1,Sobic.010G041500.5,Sobic.010G041500.4,Sobic.010G041500.6,Sobic.010G041500.2
Synonym Sb10g003660
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt A0A1W0VRE1 , C5Z4B5 , A0A1W0VRD5 , A0A1W0VRE2 , A0A1W0VRE6 , A0A1W0VRG3
Pfam PF00782
Panther DB PTHR10159 PTHR10159:SF358
NCBI CDD KOG1719; Dual specificity phosphatase
KEGG Orthology -
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT2G35680 : Phosphotyrosine protein phosphatases superfamily protein
RAP-DB (Rice) LOC_Os06g05870.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a050009
Brachypodium PNT76538
Barley HORVU7Hr1G022560.6 , HORVU7Hr1G022560.7 , HORVU7Hr1G022560.4 , HORVU7Hr1G022560.5 , HORVU7Hr1G022560.2 , HORVU7Hr1G022560.3 , HORVU7Hr1G022560.1 , HORVU7Hr1G022560.8 , HORVU7Hr1G022560.9 , HORVU7Hr1G022560.18 , HORVU7Hr1G022560.19 , HORVU7Hr1G022560.14 , HORVU7Hr1G022560.15 , HORVU7Hr1G022560.16 , HORVU7Hr1G022560.17 , HORVU7Hr1G022560.10 , HORVU7Hr1G022560.11 , HORVU7Hr1G022560.12 , HORVU7Hr1G022560.13 , HORVU7Hr1G022560.21 , HORVU7Hr1G022560.20 , HORVU7Hr1G022560.23 , HORVU7Hr1G022560.22
Wheat TraesCS7B02G006000 , TraesCS7A02G107300 , TraesCS7D02G101700
Populus -


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cDNA sequences
Sobic.010G041500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G170301 - -
2 Sobic.004G288900 protein kinase, putative, expressed -
3 Sobic.003G043650 - -
4 Sobic.002G076932 - -
5 Sobic.002G138200 domain of unknown function DUF966 domain containing protein, expressed -
6 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
7 Sobic.009G122201 - -
8 Sobic.005G083866 - -
9 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
10 Sobic.004G184500 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
11 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.002G346250 - -
13 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
14 Sobic.001G176800 - -
15 Sobic.005G094500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
16 Sobic.003G202900 expressed protein -
17 Sobic.001G312801 - -
18 Sobic.004G047001 - -
19 Sobic.002G018133 - -
20 Sobic.001G468200 MT-A70 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G041500 Sobic010G041500 Sobic009G170301 Sobic009G170301 Sobic010G041500--Sobic009G170301 Sobic004G288900 Sobic004G288900 Sobic010G041500--Sobic004G288900 Sobic003G043650 Sobic003G043650 Sobic010G041500--Sobic003G043650 Sobic002G076932 Sobic002G076932 Sobic010G041500--Sobic002G076932 Sobic002G138200 Sobic002G138200 Sobic010G041500--Sobic002G138200 Sobic009G184500 Sobic009G184500 Sobic010G041500--Sobic009G184500 Sobic009G122201 Sobic009G122201 Sobic010G041500--Sobic009G122201 Sobic005G083866 Sobic005G083866 Sobic010G041500--Sobic005G083866 Sobic001G490600 Sobic001G490600 Sobic010G041500--Sobic001G490600 Sobic009G170301--Sobic002G076932 Sobic005G094500 Sobic005G094500 Sobic009G170301--Sobic005G094500 Sobic009G170301--Sobic010G041500 Sobic001G368000 Sobic001G368000 Sobic009G170301--Sobic001G368000 Sobic003G202900 Sobic003G202900 Sobic009G170301--Sobic003G202900 Sobic002G395900 Sobic002G395900 Sobic009G170301--Sobic002G395900 Sobic001G468200 Sobic001G468200 Sobic009G170301--Sobic001G468200 Sobic009G170301--Sobic001G490600 Sobic007G017300 Sobic007G017300 Sobic009G170301--Sobic007G017300 Sobic001G312801 Sobic001G312801 Sobic004G288900--Sobic001G312801 Sobic004G288900--Sobic002G138200 Sobic004G288900--Sobic003G043650 Sobic004G288900--Sobic009G184500 Sobic004G288900--Sobic010G041500 Sobic008G096300 Sobic008G096300 Sobic004G288900--Sobic008G096300 Sobic004G288900--Sobic001G490600 Sobic004G288900--Sobic009G170301 Sobic003G241600 Sobic003G241600 Sobic004G288900--Sobic003G241600 Sobic004G200000 Sobic004G200000 Sobic003G043650--Sobic004G200000 Sobic003G043650--Sobic005G083866 Sobic003G043650--Sobic002G138200 Sobic003G043650--Sobic004G288900 Sobic004G047001 Sobic004G047001 Sobic003G043650--Sobic004G047001 Sobic009G082500 Sobic009G082500 Sobic003G043650--Sobic009G082500 Sobic003G043650--Sobic010G041500 Sobic007G016300 Sobic007G016300 Sobic003G043650--Sobic007G016300 Sobic002G346250 Sobic002G346250 Sobic003G043650--Sobic002G346250 Sobic002G076932--Sobic009G170301 Sobic002G076932--Sobic005G094500 Sobic001G204200 Sobic001G204200 Sobic002G076932--Sobic001G204200 Sobic008G054400 Sobic008G054400 Sobic002G076932--Sobic008G054400 Sobic002G076932--Sobic010G041500 Sobic008G166250 Sobic008G166250 Sobic002G076932--Sobic008G166250 Sobic004G184500 Sobic004G184500 Sobic002G076932--Sobic004G184500 Sobic002G076932--Sobic003G202900 Sobic001G212701 Sobic001G212701 Sobic002G076932--Sobic001G212701 Sobic002G138200--Sobic004G288900 Sobic002G138200--Sobic003G043650 Sobic002G138200--Sobic004G047001 Sobic003G093500 Sobic003G093500 Sobic002G138200--Sobic003G093500 Sobic002G138200--Sobic009G184500 Sobic001G214400 Sobic001G214400 Sobic002G138200--Sobic001G214400 Sobic002G138200--Sobic010G041500 Sobic002G138200--Sobic005G094500 Sobic002G138200--Sobic007G017300 Sobic009G184500--Sobic001G490600 Sobic009G184500--Sobic007G017300 Sobic009G184500--Sobic001G368000 Sobic009G004500 Sobic009G004500 Sobic009G184500--Sobic009G004500 Sobic009G184500--Sobic004G288900 Sobic002G360701 Sobic002G360701 Sobic009G184500--Sobic002G360701 Sobic010G150600 Sobic010G150600 Sobic009G184500--Sobic010G150600 Sobic001G483200 Sobic001G483200 Sobic009G184500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic009G184500--Sobic005G155001 Sobic009G122201--Sobic010G041500 Sobic009G122201--Sobic009G184500 Sobic008G151900 Sobic008G151900 Sobic009G122201--Sobic008G151900 Sobic009G122201--Sobic004G288900 Sobic004G224100 Sobic004G224100 Sobic009G122201--Sobic004G224100 Sobic009G122201--Sobic004G047001 Sobic004G202750 Sobic004G202750 Sobic009G122201--Sobic004G202750 Sobic009G122201--Sobic002G138200 Sobic009G122201--Sobic001G490600 Sobic005G083866--Sobic003G043650 Sobic005G083866--Sobic004G200000 Sobic005G083866--Sobic007G016300 Sobic002G331200 Sobic002G331200 Sobic005G083866--Sobic002G331200 Sobic001G311700 Sobic001G311700 Sobic005G083866--Sobic001G311700 Sobic002G030001 Sobic002G030001 Sobic005G083866--Sobic002G030001 Sobic002G018133 Sobic002G018133 Sobic005G083866--Sobic002G018133 Sobic007G081400 Sobic007G081400 Sobic005G083866--Sobic007G081400 Sobic005G083866--Sobic010G041500 Sobic001G490600--Sobic009G184500 Sobic001G490600--Sobic001G368000 Sobic001G490600--Sobic007G017300 Sobic001G490600--Sobic009G004500 Sobic001G490600--Sobic001G312801 Sobic008G185000 Sobic008G185000 Sobic001G490600--Sobic008G185000 Sobic001G490600--Sobic009G170301 Sobic001G490600--Sobic001G483200 Sobic001G490600--Sobic005G155001
Octagon: transcription factors


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