Gene annotation
Transcriptome id Sobic.002G264700.2
Synonym EIF3G1, ATEIF3G1
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1W0W602
Pfam PF00076
Panther DB PTHR10352:SF1 PTHR10352
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003743; translation initiation factor activity GO:0005737cytoplasm GO:0005852eukaryotic translation initiation factor 3 complex GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT3G11400 : eukaryotic translation initiation factor 3G1
RAP-DB (Rice) LOC_Os05g23790.1 : retrotransposon, putative, centromere-specific, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G192801 - -
2 Sobic.010G217466 - -
3 Sobic.010G173550 - -
4 Sobic.002G171200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.001G378150 - -
6 Sobic.002G246950 - -
7 Sobic.002G295550 - -
8 Sobic.002G149550 - K03879: NADH-ubiquinone oxidoreductase chain 2
9 Sobic.009G221701 - -
10 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.003G018400 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.003G299400 - -
13 Sobic.001G428900 S-domain receptor-like protein kinase, putative, expressed -
14 Sobic.010G149900 - -
15 Sobic.005G106800 - -
16 Sobic.003G336400 pentatricopeptide, putative, expressed -
17 Sobic.002G285950 - -
18 Sobic.005G008301 - -
19 Sobic.002G410050 - -
20 Sobic.003G013400 S-locus lectin protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G264700 Sobic002G264700 Sobic003G192801 Sobic003G192801 Sobic002G264700--Sobic003G192801 Sobic010G217466 Sobic010G217466 Sobic002G264700--Sobic010G217466 Sobic010G173550 Sobic010G173550 Sobic002G264700--Sobic010G173550 Sobic002G171200 Sobic002G171200 Sobic002G264700--Sobic002G171200 Sobic001G378150 Sobic001G378150 Sobic002G264700--Sobic001G378150 Sobic002G246950 Sobic002G246950 Sobic002G264700--Sobic002G246950 Sobic002G295550 Sobic002G295550 Sobic002G264700--Sobic002G295550 Sobic002G149550 Sobic002G149550 Sobic002G264700--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic002G264700--Sobic009G221701 Sobic003G192801--Sobic002G295550 Sobic006G019000 Sobic006G019000 Sobic003G192801--Sobic006G019000 Sobic003G192801--Sobic002G264700 Sobic006G153550 Sobic006G153550 Sobic003G192801--Sobic006G153550 Sobic010G251800 Sobic010G251800 Sobic003G192801--Sobic010G251800 Sobic003G232200 Sobic003G232200 Sobic003G192801--Sobic003G232200 Sobic002G429200 Sobic002G429200 Sobic003G192801--Sobic002G429200 Sobic004G072950 Sobic004G072950 Sobic003G192801--Sobic004G072950 Sobic003G288900 Sobic003G288900 Sobic003G192801--Sobic003G288900 Sobic010G217466--Sobic009G221701 Sobic010G217466--Sobic002G149550 Sobic006G242600 Sobic006G242600 Sobic010G217466--Sobic006G242600 Sobic003G396400 Sobic003G396400 Sobic010G217466--Sobic003G396400 Sobic010G217466--Sobic002G429200 Sobic006G116600 Sobic006G116600 Sobic010G217466--Sobic006G116600 Sobic002G285950 Sobic002G285950 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic010G217466--Sobic001G378150 Sobic005G106800 Sobic005G106800 Sobic010G173550--Sobic005G106800 Sobic003G299400 Sobic003G299400 Sobic010G173550--Sobic003G299400 Sobic009G165050 Sobic009G165050 Sobic010G173550--Sobic009G165050 Sobic004G325766 Sobic004G325766 Sobic010G173550--Sobic004G325766 Sobic005G008301 Sobic005G008301 Sobic010G173550--Sobic005G008301 Sobic003G045800 Sobic003G045800 Sobic010G173550--Sobic003G045800 Sobic002G205201 Sobic002G205201 Sobic010G173550--Sobic002G205201 Sobic007G152200 Sobic007G152200 Sobic010G173550--Sobic007G152200 Sobic010G275550 Sobic010G275550 Sobic010G173550--Sobic010G275550 Sobic002G171200--Sobic010G173550 Sobic002G171200--Sobic005G008301 Sobic002G171200--Sobic003G045800 Sobic007G210400 Sobic007G210400 Sobic002G171200--Sobic007G210400 Sobic003G198701 Sobic003G198701 Sobic002G171200--Sobic003G198701 Sobic002G410050 Sobic002G410050 Sobic002G171200--Sobic002G410050 Sobic002G171200--Sobic003G299400 Sobic002G171200--Sobic004G325766 Sobic003G423100 Sobic003G423100 Sobic002G171200--Sobic003G423100 Sobic001G378150--Sobic002G285950 Sobic007G119300 Sobic007G119300 Sobic001G378150--Sobic007G119300 Sobic001G378150--Sobic010G217466 Sobic001G378150--Sobic009G221701 Sobic001G378150--Sobic002G429200 Sobic001G378150--Sobic002G149550 Sobic001G378150--Sobic002G246950 Sobic003G336400 Sobic003G336400 Sobic001G378150--Sobic003G336400 Sobic003G224000 Sobic003G224000 Sobic001G378150--Sobic003G224000 Sobic002G060750 Sobic002G060750 Sobic002G246950--Sobic002G060750 Sobic003G398900 Sobic003G398900 Sobic002G246950--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic002G246950--Sobic003G018400 Sobic003G303800 Sobic003G303800 Sobic002G246950--Sobic003G303800 Sobic002G246950--Sobic001G378150 Sobic002G411700 Sobic002G411700 Sobic002G246950--Sobic002G411700 Sobic002G246950--Sobic002G285950 Sobic002G246950--Sobic002G149550 Sobic007G094000 Sobic007G094000 Sobic002G246950--Sobic007G094000 Sobic002G295550--Sobic003G192801 Sobic002G295550--Sobic010G251800 Sobic002G295550--Sobic003G288900 Sobic002G295550--Sobic004G072950 Sobic003G292800 Sobic003G292800 Sobic002G295550--Sobic003G292800 Sobic010G074960 Sobic010G074960 Sobic002G295550--Sobic010G074960 Sobic002G295550--Sobic006G019000 Sobic002G295550--Sobic005G106800 Sobic009G004000 Sobic009G004000 Sobic002G295550--Sobic009G004000 Sobic002G149550--Sobic009G221701 Sobic002G149550--Sobic010G217466 Sobic002G149550--Sobic002G285950 Sobic002G149550--Sobic006G242600 Sobic002G149550--Sobic006G116600 Sobic002G149550--Sobic001G378150 Sobic002G149550--Sobic002G429200 Sobic002G149550--Sobic003G396400 Sobic002G149550--Sobic003G336400 Sobic009G221701--Sobic010G217466 Sobic009G221701--Sobic002G149550 Sobic009G221701--Sobic006G242600 Sobic009G221701--Sobic002G429200 Sobic009G221701--Sobic003G396400 Sobic009G221701--Sobic005G106800 Sobic009G221701--Sobic003G299400 Sobic009G221701--Sobic002G285950 Sobic009G221701--Sobic006G116600
Octagon: transcription factors


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