Gene annotation
Transcriptome id Sobic.002G171200.4,Sobic.002G171200.2,Sobic.002G171200.3
Synonym CSLD2, ATCSLD2, Sb02g022011
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CSLF3 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1W0W4I0 , A0A1W0W4H7 , A0A1B6QBY7
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF71
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G32180 : cellulose-synthase like D2,cellulose synthase-like D6
RAP-DB (Rice) LOC_Os07g36750.1 : CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a055112 , Zm00025a048344 , Zm00025a006226 , Zm00025a030058
Brachypodium PNT68814 , KQJ99839 , KQJ99838 , PNT68811 , KQJ99837 , KQJ95295 , KQK15829 , PNT68813 , KQJ99840 , PNT68812
Barley HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU7Hr1G121040.6 , HORVU7Hr1G121040.5 , HORVU7Hr1G121040.4 , HORVU7Hr1G121040.3 , HORVU7Hr1G121040.2 , HORVU7Hr1G121040.1 , HORVU1Hr1G022900.2 , HORVU1Hr1G022900.3 , HORVU1Hr1G022900.6 , HORVU1Hr1G022900.7 , HORVU1Hr1G022900.4 , HORVU1Hr1G022900.5 , HORVU1Hr1G022900.8 , HORVU1Hr1G022900.9 , HORVU2Hr1G042240.4 , HORVU2Hr1G042240.5 , HORVU2Hr1G042240.1 , HORVU2Hr1G042240.2 , HORVU2Hr1G042240.3 , HORVU1Hr1G022900.10 , HORVU1Hr1G022900.11
Wheat TraesCS7D02G555000 , TraesCS2D02G217000 , TraesCS2D02G126100 , TraesCS2A02G210000 , TraesCS2A02G210400 , TraesCS2D02G216800 , TraesCSU02G003300 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS2B02G236500 , TraesCS1A02G099100 , TraesCS2A02G122600 , TraesCS2B02G144900 , TraesCS1D02G107100 , TraesCS7D02G294300 , TraesCS2A02G565500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G173550 - -
2 Sobic.005G008301 - -
3 Sobic.003G045800 - -
4 Sobic.007G210400 lipoxygenase, chloroplast precursor, putative, expressed K00454: lipoxygenase
5 Sobic.003G198701 - -
6 Sobic.002G410050 - -
7 Sobic.003G299400 - -
8 Sobic.004G325766 - -
9 Sobic.003G423100 NAM, putative, expressed -
10 Sobic.005G106800 - -
11 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
12 Sobic.009G165050 - -
13 Sobic.002G205201 - -
14 Sobic.002G264700 RNA recognition motif containing protein, putative, expressed -
15 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.001G060666 - -
17 Sobic.010G275550 - -
18 Sobic.003G336400 pentatricopeptide, putative, expressed -
19 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
20 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic002G171200 Sobic002G171200 Sobic010G173550 Sobic010G173550 Sobic002G171200--Sobic010G173550 Sobic005G008301 Sobic005G008301 Sobic002G171200--Sobic005G008301 Sobic003G045800 Sobic003G045800 Sobic002G171200--Sobic003G045800 Sobic007G210400 Sobic007G210400 Sobic002G171200--Sobic007G210400 Sobic003G198701 Sobic003G198701 Sobic002G171200--Sobic003G198701 Sobic002G410050 Sobic002G410050 Sobic002G171200--Sobic002G410050 Sobic003G299400 Sobic003G299400 Sobic002G171200--Sobic003G299400 Sobic004G325766 Sobic004G325766 Sobic002G171200--Sobic004G325766 Sobic003G423100 Sobic003G423100 Sobic002G171200--Sobic003G423100 Sobic005G106800 Sobic005G106800 Sobic010G173550--Sobic005G106800 Sobic010G173550--Sobic003G299400 Sobic009G165050 Sobic009G165050 Sobic010G173550--Sobic009G165050 Sobic010G173550--Sobic004G325766 Sobic010G173550--Sobic005G008301 Sobic010G173550--Sobic003G045800 Sobic002G205201 Sobic002G205201 Sobic010G173550--Sobic002G205201 Sobic007G152200 Sobic007G152200 Sobic010G173550--Sobic007G152200 Sobic010G275550 Sobic010G275550 Sobic010G173550--Sobic010G275550 Sobic005G008301--Sobic004G325766 Sobic005G008301--Sobic007G152200 Sobic001G060666 Sobic001G060666 Sobic005G008301--Sobic001G060666 Sobic010G231400 Sobic010G231400 Sobic005G008301--Sobic010G231400 Sobic005G008301--Sobic002G205201 Sobic006G185400 Sobic006G185400 Sobic005G008301--Sobic006G185400 Sobic005G008301--Sobic010G173550 Sobic004G330500 Sobic004G330500 Sobic005G008301--Sobic004G330500 Sobic005G008301--Sobic010G275550 Sobic008G023500 Sobic008G023500 Sobic003G045800--Sobic008G023500 Sobic007G072901 Sobic007G072901 Sobic003G045800--Sobic007G072901 Sobic003G045800--Sobic007G152200 Sobic005G189400 Sobic005G189400 Sobic003G045800--Sobic005G189400 Sobic009G164200 Sobic009G164200 Sobic003G045800--Sobic009G164200 Sobic004G351866 Sobic004G351866 Sobic003G045800--Sobic004G351866 Sobic003G045800--Sobic004G330500 Sobic010G014600 Sobic010G014600 Sobic003G045800--Sobic010G014600 Sobic003G045800--Sobic006G185400 Sobic007G210400--Sobic007G072901 Sobic007G210400--Sobic007G152200 Sobic007G210400--Sobic005G189400 Sobic007G210400--Sobic004G330500 Sobic009G010800 Sobic009G010800 Sobic007G210400--Sobic009G010800 Sobic007G210400--Sobic010G014600 Sobic006G090201 Sobic006G090201 Sobic007G210400--Sobic006G090201 Sobic003G245700 Sobic003G245700 Sobic007G210400--Sobic003G245700 Sobic007G210400--Sobic006G185400 Sobic003G198701--Sobic004G325766 Sobic003G198701--Sobic005G106800 Sobic003G198701--Sobic003G299400 Sobic003G198701--Sobic003G423100 Sobic007G056400 Sobic007G056400 Sobic003G198701--Sobic007G056400 Sobic003G198701--Sobic007G072901 Sobic003G198701--Sobic003G045800 Sobic003G357000 Sobic003G357000 Sobic003G198701--Sobic003G357000 Sobic003G198701--Sobic007G152200 Sobic002G410050--Sobic009G165050 Sobic002G410050--Sobic005G106800 Sobic002G410050--Sobic003G299400 Sobic006G214101 Sobic006G214101 Sobic002G410050--Sobic006G214101 Sobic010G149900 Sobic010G149900 Sobic002G410050--Sobic010G149900 Sobic002G410050--Sobic004G351866 Sobic002G410050--Sobic010G014600 Sobic003G396400 Sobic003G396400 Sobic002G410050--Sobic003G396400 Sobic002G410050--Sobic003G045800 Sobic003G299400--Sobic005G106800 Sobic003G299400--Sobic003G357000 Sobic003G299400--Sobic004G351866 Sobic003G299400--Sobic009G165050 Sobic003G299400--Sobic002G205201 Sobic003G299400--Sobic010G275550 Sobic003G299400--Sobic003G045800 Sobic003G299400--Sobic008G023500 Sobic003G299400--Sobic004G325766 Sobic004G325766--Sobic007G152200 Sobic004G325766--Sobic005G189400 Sobic004G325766--Sobic004G330500 Sobic004G325766--Sobic010G014600 Sobic004G325766--Sobic006G185400 Sobic004G325766--Sobic010G231400 Sobic004G325766--Sobic009G164200 Sobic006G209100 Sobic006G209100 Sobic004G325766--Sobic006G209100 Sobic004G325766--Sobic002G205201 Sobic003G423100--Sobic002G205201 Sobic005G022400 Sobic005G022400 Sobic003G423100--Sobic005G022400 Sobic003G423100--Sobic003G245700 Sobic003G423100--Sobic006G090201 Sobic003G423100--Sobic005G189400 Sobic003G423100--Sobic004G330500 Sobic003G423100--Sobic006G185400 Sobic003G423100--Sobic007G152200 Sobic001G361500 Sobic001G361500 Sobic003G423100--Sobic001G361500
Octagon: transcription factors


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