Gene annotation
Transcriptome id Sobic.007G184400.1
Synonym Sb07g025450
Functional annotation 60S ribosomal protein L7, putative, expressed
UniProt C5YH93
Pfam PF08079 PF00327
Panther DB PTHR11524 PTHR11524:SF11
NCBI CDD KOG3184; 60S ribosomal protein L7
KEGG Orthology K02937; RP-L7e, large subunit ribosomal protein L7e
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01250 : Ribosomal protein L30/L7 family protein
RAP-DB (Rice) LOC_Os08g42920.1 : 60S ribosomal protein L7, putative, expressed
MaizeGDB (Corn) Zm00025a005343 , Zm00025a033621
Brachypodium PNT68523
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G184400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G005700 - -
2 Sobic.004G085200 protein of unknown function domain containing protein, expressed -
3 Sobic.002G279000 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
4 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.003G025200 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
6 Sobic.004G175700 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.001G543300 dehydrogenase, putative, expressed -
8 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
9 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
10 Sobic.010G103900 ribosomal protein L51, putative, expressed K17424: large subunit ribosomal protein L43
11 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
12 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
13 Sobic.006G266100 expressed protein -
14 Sobic.007G022500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
15 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
16 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
17 Sobic.001G398600 anaphase-promoting complex subunit 11, putative, expressed K03358: anaphase-promoting complex subunit 11
18 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
19 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
20 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4


Gene co-expression network
sample Sobic007G184400 Sobic007G184400 Sobic002G005700 Sobic002G005700 Sobic007G184400--Sobic002G005700 Sobic004G085200 Sobic004G085200 Sobic007G184400--Sobic004G085200 Sobic002G279000 Sobic002G279000 Sobic007G184400--Sobic002G279000 Sobic001G094500 Sobic001G094500 Sobic007G184400--Sobic001G094500 Sobic003G025200 Sobic003G025200 Sobic007G184400--Sobic003G025200 Sobic004G175700 Sobic004G175700 Sobic007G184400--Sobic004G175700 Sobic001G543300 Sobic001G543300 Sobic007G184400--Sobic001G543300 Sobic002G007100 Sobic002G007100 Sobic007G184400--Sobic002G007100 Sobic008G058300 Sobic008G058300 Sobic007G184400--Sobic008G058300 Sobic002G005700--Sobic007G184400 Sobic001G172800 Sobic001G172800 Sobic002G005700--Sobic001G172800 Sobic010G094500 Sobic010G094500 Sobic002G005700--Sobic010G094500 Sobic005G121100 Sobic005G121100 Sobic002G005700--Sobic005G121100 Sobic002G384200 Sobic002G384200 Sobic002G005700--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic002G005700--Sobic003G022800 Sobic007G200100 Sobic007G200100 Sobic002G005700--Sobic007G200100 Sobic006G212000 Sobic006G212000 Sobic002G005700--Sobic006G212000 Sobic006G016600 Sobic006G016600 Sobic002G005700--Sobic006G016600 Sobic002G364100 Sobic002G364100 Sobic004G085200--Sobic002G364100 Sobic010G103900 Sobic010G103900 Sobic004G085200--Sobic010G103900 Sobic004G085200--Sobic003G025200 Sobic002G364500 Sobic002G364500 Sobic004G085200--Sobic002G364500 Sobic009G022400 Sobic009G022400 Sobic004G085200--Sobic009G022400 Sobic002G049300 Sobic002G049300 Sobic004G085200--Sobic002G049300 Sobic004G198500 Sobic004G198500 Sobic004G085200--Sobic004G198500 Sobic006G260400 Sobic006G260400 Sobic004G085200--Sobic006G260400 Sobic004G322200 Sobic004G322200 Sobic004G085200--Sobic004G322200 Sobic002G279000--Sobic001G094500 Sobic004G137900 Sobic004G137900 Sobic002G279000--Sobic004G137900 Sobic001G544100 Sobic001G544100 Sobic002G279000--Sobic001G544100 Sobic006G231700 Sobic006G231700 Sobic002G279000--Sobic006G231700 Sobic001G532100 Sobic001G532100 Sobic002G279000--Sobic001G532100 Sobic003G190800 Sobic003G190800 Sobic002G279000--Sobic003G190800 Sobic004G012800 Sobic004G012800 Sobic002G279000--Sobic004G012800 Sobic007G152400 Sobic007G152400 Sobic002G279000--Sobic007G152400 Sobic002G279000--Sobic004G175700 Sobic001G094500--Sobic006G231700 Sobic001G128400 Sobic001G128400 Sobic001G094500--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic001G094500--Sobic005G111100 Sobic004G265700 Sobic004G265700 Sobic001G094500--Sobic004G265700 Sobic001G094500--Sobic002G279000 Sobic001G094500--Sobic001G532100 Sobic001G094500--Sobic007G152400 Sobic001G529000 Sobic001G529000 Sobic001G094500--Sobic001G529000 Sobic007G163700 Sobic007G163700 Sobic001G094500--Sobic007G163700 Sobic001G377800 Sobic001G377800 Sobic003G025200--Sobic001G377800 Sobic006G081100 Sobic006G081100 Sobic003G025200--Sobic006G081100 Sobic001G085400 Sobic001G085400 Sobic003G025200--Sobic001G085400 Sobic002G406500 Sobic002G406500 Sobic003G025200--Sobic002G406500 Sobic001G058900 Sobic001G058900 Sobic003G025200--Sobic001G058900 Sobic006G201500 Sobic006G201500 Sobic003G025200--Sobic006G201500 Sobic003G025200--Sobic002G049300 Sobic003G025200--Sobic008G058300 Sobic002G115000 Sobic002G115000 Sobic003G025200--Sobic002G115000 Sobic001G404100 Sobic001G404100 Sobic004G175700--Sobic001G404100 Sobic003G367900 Sobic003G367900 Sobic004G175700--Sobic003G367900 Sobic008G137600 Sobic008G137600 Sobic004G175700--Sobic008G137600 Sobic004G175700--Sobic002G279000 Sobic004G175700--Sobic007G152400 Sobic004G175700--Sobic001G532100 Sobic006G079900 Sobic006G079900 Sobic004G175700--Sobic006G079900 Sobic001G402300 Sobic001G402300 Sobic004G175700--Sobic001G402300 Sobic001G285300 Sobic001G285300 Sobic004G175700--Sobic001G285300 Sobic001G294200 Sobic001G294200 Sobic001G543300--Sobic001G294200 Sobic007G167700 Sobic007G167700 Sobic001G543300--Sobic007G167700 Sobic007G203700 Sobic007G203700 Sobic001G543300--Sobic007G203700 Sobic001G543300--Sobic008G058300 Sobic004G316900 Sobic004G316900 Sobic001G543300--Sobic004G316900 Sobic001G129300 Sobic001G129300 Sobic001G543300--Sobic001G129300 Sobic004G060600 Sobic004G060600 Sobic001G543300--Sobic004G060600 Sobic004G018800 Sobic004G018800 Sobic001G543300--Sobic004G018800 Sobic006G242300 Sobic006G242300 Sobic001G543300--Sobic006G242300 Sobic005G157200 Sobic005G157200 Sobic002G007100--Sobic005G157200 Sobic002G007100--Sobic003G025200 Sobic010G029400 Sobic010G029400 Sobic002G007100--Sobic010G029400 Sobic002G007100--Sobic008G058300 Sobic002G007100--Sobic002G406500 Sobic004G196400 Sobic004G196400 Sobic002G007100--Sobic004G196400 Sobic002G007100--Sobic006G201500 Sobic003G280700 Sobic003G280700 Sobic002G007100--Sobic003G280700 Sobic002G007100--Sobic006G081100 Sobic008G058300--Sobic005G157200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic004G300900 Sobic004G300900 Sobic008G058300--Sobic004G300900 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800
Octagon: transcription factors


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