Gene annotation
| Transcriptome id | Sobic.003G286100.1 |
|---|---|
| Synonym | |
| Functional annotation | mitochondrial import receptor subunit TOM7-1, putative, expressed |
| UniProt | A0A1B6Q5X2 |
| Pfam | PF08038 |
| Panther DB | PTHR34944 PTHR34944:SF1 |
| NCBI CDD | - |
| KEGG Orthology | K17771; mitochondrial import receptor subunit TOM7 |
| Gene Ontology | GO:0005742; mitochondrial outer membrane translocase complex |
Orthologs (automatic annotation)
| TAIR | AT5G41685 : Mitochondrial outer membrane translocase complex, subunit Tom7 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g50654.1 : mitochondrial import receptor subunit TOM7-1, putative, expressed |
| MaizeGDB (Corn) | Zm00025a038601 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G209300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 2 | Sobic.001G158000 | selT/selW/selH selenoprotein domain containing protein, expressed | - |
| 3 | Sobic.004G265400 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 4 | Sobic.002G403400 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 5 | Sobic.002G059200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 6 | Sobic.004G013500 | UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed | K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase |
| 7 | Sobic.001G193400 | DUF538 domain containing protein, putative, expressed | - |
| 8 | Sobic.007G221800 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 9 | Sobic.007G149600 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 10 | Sobic.004G230900 | RNA recognition motif containing protein, putative, expressed | - |
| 11 | Sobic.001G416900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 12 | Sobic.003G067500 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 13 | Sobic.004G275500 | helix-loop-helix DNA-binding protein, putative, expressed | - |
| 14 | Sobic.003G350100 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 15 | Sobic.002G326050 | - | - |
| 16 | Sobic.003G067300 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
| 17 | Sobic.005G232000 | thioesterase family protein, putative, expressed | K17362: acyl-coenzyme A thioesterase 13 |
| 18 | Sobic.003G200501 | - | K11252: histone H2B |
| 19 | Sobic.002G276700 | protein of unknown function containing protein, expressed | - |
| 20 | Sobic.002G210200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11252: histone H2B |
Gene co-expression network
Octagon: transcription factors
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