Gene annotation
Transcriptome id Sobic.004G066000.1
Synonym Sb04g005530
Functional annotation expressed protein
UniProt C5XWW0
Pfam -
Panther DB PTHR33476 PTHR33476:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31805 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os02g08470.1 : expressed protein
MaizeGDB (Corn) Zm00025a019237
Brachypodium KQJ93673 , KQJ93672
Barley HORVU6Hr1G028740.1 , HORVU6Hr1G028740.3 , HORVU6Hr1G028740.2 , HORVU6Hr1G028740.4
Wheat TraesCS6A02G146800 , TraesCS6A02G146800 , TraesCS6D02G136100 , TraesCS6B02G175000 , TraesCS6B02G175000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
3 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
5 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
6 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
7 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
9 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
10 Sobic.003G200501 - K11252: histone H2B
11 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
15 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
16 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
17 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
18 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
19 Sobic.002G326050 - -
20 Sobic.007G224600 - -


Gene co-expression network
sample Sobic004G066000 Sobic004G066000 Sobic004G275500 Sobic004G275500 Sobic004G066000--Sobic004G275500 Sobic001G158000 Sobic001G158000 Sobic004G066000--Sobic001G158000 Sobic007G221800 Sobic007G221800 Sobic004G066000--Sobic007G221800 Sobic007G149600 Sobic007G149600 Sobic004G066000--Sobic007G149600 Sobic007G081300 Sobic007G081300 Sobic004G066000--Sobic007G081300 Sobic004G265400 Sobic004G265400 Sobic004G066000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic004G066000--Sobic001G519300 Sobic001G193400 Sobic001G193400 Sobic004G066000--Sobic001G193400 Sobic003G067300 Sobic003G067300 Sobic004G066000--Sobic003G067300 Sobic001G115800 Sobic001G115800 Sobic004G275500--Sobic001G115800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic004G275500--Sobic001G158000 Sobic004G275500--Sobic007G149600 Sobic007G224600 Sobic007G224600 Sobic004G275500--Sobic007G224600 Sobic004G275500--Sobic001G193400 Sobic002G284901 Sobic002G284901 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800 Sobic001G158000--Sobic007G221800 Sobic002G326050 Sobic002G326050 Sobic001G158000--Sobic002G326050 Sobic001G158000--Sobic004G265400 Sobic001G158000--Sobic001G519300 Sobic001G158000--Sobic007G224600 Sobic001G158000--Sobic007G149600 Sobic003G067500 Sobic003G067500 Sobic001G158000--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic001G158000--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic001G158000--Sobic002G210200 Sobic007G221800--Sobic007G149600 Sobic007G221800--Sobic003G200501 Sobic007G221800--Sobic002G210200 Sobic007G221800--Sobic004G265400 Sobic007G221800--Sobic003G067500 Sobic007G221800--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic007G221800--Sobic002G320900 Sobic007G221800--Sobic003G067300 Sobic007G093400 Sobic007G093400 Sobic007G221800--Sobic007G093400 Sobic007G149600--Sobic004G265400 Sobic007G149600--Sobic007G221800 Sobic007G149600--Sobic003G067300 Sobic007G149600--Sobic003G200501 Sobic007G149600--Sobic002G210200 Sobic003G350100 Sobic003G350100 Sobic007G149600--Sobic003G350100 Sobic007G149600--Sobic003G067500 Sobic007G149600--Sobic002G284901 Sobic007G149600--Sobic001G193400 Sobic003G301200 Sobic003G301200 Sobic007G081300--Sobic003G301200 Sobic006G278400 Sobic006G278400 Sobic007G081300--Sobic006G278400 Sobic010G189800 Sobic010G189800 Sobic007G081300--Sobic010G189800 Sobic001G180300 Sobic001G180300 Sobic007G081300--Sobic001G180300 Sobic003G092200 Sobic003G092200 Sobic007G081300--Sobic003G092200 Sobic004G227000 Sobic004G227000 Sobic007G081300--Sobic004G227000 Sobic007G081300--Sobic007G149600 Sobic006G187600 Sobic006G187600 Sobic007G081300--Sobic006G187600 Sobic006G005000 Sobic006G005000 Sobic007G081300--Sobic006G005000 Sobic004G265400--Sobic007G149600 Sobic004G265400--Sobic007G221800 Sobic004G265400--Sobic003G350100 Sobic004G265400--Sobic003G067300 Sobic004G265400--Sobic003G067500 Sobic004G265400--Sobic003G200501 Sobic004G265400--Sobic002G210200 Sobic004G265400--Sobic001G193400 Sobic002G059200 Sobic002G059200 Sobic004G265400--Sobic002G059200 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic006G065700 Sobic006G065700 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic003G120400 Sobic003G120400 Sobic001G519300--Sobic003G120400 Sobic001G193400--Sobic003G350100 Sobic001G193400--Sobic003G067300 Sobic001G193400--Sobic004G265400 Sobic001G193400--Sobic007G149600 Sobic001G193400--Sobic003G200501 Sobic001G193400--Sobic003G067500 Sobic001G193400--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200 Sobic003G067300--Sobic003G350100 Sobic003G067300--Sobic003G200501 Sobic003G067300--Sobic003G067500 Sobic003G067300--Sobic002G210200 Sobic003G067300--Sobic007G149600 Sobic003G067300--Sobic002G387100 Sobic003G067300--Sobic002G430200 Sobic003G367401 Sobic003G367401 Sobic003G067300--Sobic003G367401 Sobic003G067300--Sobic004G265400
Octagon: transcription factors


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