Gene annotation
Transcriptome id Sobic.006G266300.1,Sobic.006G266300.2
Synonym Sb06g032860
Functional annotation expressed protein
UniProt C5YAI0
Pfam PF14364
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11220 : Protein of unknown function (DUF761)
RAP-DB (Rice) LOC_Os04g57970.1 : expressed protein
MaizeGDB (Corn) Zm00025a057377 , Zm00025a054503 , Zm00025a009306
Brachypodium KQJ85277
Barley HORVU0Hr1G005750.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G266300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G042900 expressed protein K17411: small subunit ribosomal protein S33
2 Sobic.003G043700 expressed protein -
3 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
4 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
6 Sobic.001G161601 - K14484: auxin-responsive protein IAA
7 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
8 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
9 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
10 Sobic.002G407100 expressed protein -
11 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
12 Sobic.003G119500 expressed protein -
13 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
14 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
15 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
16 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.003G360600 cytochrome P450, putative, expressed K15401: long-chain fatty acid omega-monooxygenase
18 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.001G494000 Expressed in older stem(PubMedID : 28649278)@homeodomain protein, putative, expressed -


Gene co-expression network
sample Sobic006G266300 Sobic006G266300 Sobic009G042900 Sobic009G042900 Sobic006G266300--Sobic009G042900 Sobic003G043700 Sobic003G043700 Sobic006G266300--Sobic003G043700 Sobic009G121900 Sobic009G121900 Sobic006G266300--Sobic009G121900 Sobic009G232100 Sobic009G232100 Sobic006G266300--Sobic009G232100 Sobic002G350700 Sobic002G350700 Sobic006G266300--Sobic002G350700 Sobic001G161601 Sobic001G161601 Sobic006G266300--Sobic001G161601 Sobic002G270000 Sobic002G270000 Sobic006G266300--Sobic002G270000 Sobic003G347900 Sobic003G347900 Sobic006G266300--Sobic003G347900 Sobic001G418100 Sobic001G418100 Sobic006G266300--Sobic001G418100 Sobic001G304400 Sobic001G304400 Sobic009G042900--Sobic001G304400 Sobic001G286200 Sobic001G286200 Sobic009G042900--Sobic001G286200 Sobic001G510800 Sobic001G510800 Sobic009G042900--Sobic001G510800 Sobic002G078300 Sobic002G078300 Sobic009G042900--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic009G042900--Sobic010G264300 Sobic006G035900 Sobic006G035900 Sobic009G042900--Sobic006G035900 Sobic001G058900 Sobic001G058900 Sobic009G042900--Sobic001G058900 Sobic006G057200 Sobic006G057200 Sobic009G042900--Sobic006G057200 Sobic002G304900 Sobic002G304900 Sobic009G042900--Sobic002G304900 Sobic003G043700--Sobic001G161601 Sobic004G042000 Sobic004G042000 Sobic003G043700--Sobic004G042000 Sobic002G213600 Sobic002G213600 Sobic003G043700--Sobic002G213600 Sobic001G111000 Sobic001G111000 Sobic003G043700--Sobic001G111000 Sobic003G016100 Sobic003G016100 Sobic003G043700--Sobic003G016100 Sobic001G161500 Sobic001G161500 Sobic003G043700--Sobic001G161500 Sobic003G219800 Sobic003G219800 Sobic003G043700--Sobic003G219800 Sobic009G035300 Sobic009G035300 Sobic003G043700--Sobic009G035300 Sobic003G316000 Sobic003G316000 Sobic003G043700--Sobic003G316000 Sobic002G407100 Sobic002G407100 Sobic009G121900--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic009G121900--Sobic007G127100 Sobic004G064400 Sobic004G064400 Sobic009G121900--Sobic004G064400 Sobic010G008400 Sobic010G008400 Sobic009G121900--Sobic010G008400 Sobic002G327300 Sobic002G327300 Sobic009G121900--Sobic002G327300 Sobic009G065300 Sobic009G065300 Sobic009G121900--Sobic009G065300 Sobic003G110200 Sobic003G110200 Sobic009G121900--Sobic003G110200 Sobic001G432700 Sobic001G432700 Sobic009G121900--Sobic001G432700 Sobic003G376100 Sobic003G376100 Sobic009G121900--Sobic003G376100 Sobic009G088900 Sobic009G088900 Sobic009G232100--Sobic009G088900 Sobic001G049900 Sobic001G049900 Sobic009G232100--Sobic001G049900 Sobic009G188000 Sobic009G188000 Sobic009G232100--Sobic009G188000 Sobic001G310300 Sobic001G310300 Sobic009G232100--Sobic001G310300 Sobic010G085800 Sobic010G085800 Sobic009G232100--Sobic010G085800 Sobic001G361600 Sobic001G361600 Sobic009G232100--Sobic001G361600 Sobic002G396400 Sobic002G396400 Sobic009G232100--Sobic002G396400 Sobic001G304100 Sobic001G304100 Sobic009G232100--Sobic001G304100 Sobic009G109000 Sobic009G109000 Sobic009G232100--Sobic009G109000 Sobic002G350700--Sobic001G161601 Sobic001G059700 Sobic001G059700 Sobic002G350700--Sobic001G059700 Sobic002G350700--Sobic010G085800 Sobic001G112100 Sobic001G112100 Sobic002G350700--Sobic001G112100 Sobic002G350700--Sobic009G232100 Sobic002G350700--Sobic009G088900 Sobic001G159900 Sobic001G159900 Sobic002G350700--Sobic001G159900 Sobic004G055100 Sobic004G055100 Sobic002G350700--Sobic004G055100 Sobic001G264700 Sobic001G264700 Sobic002G350700--Sobic001G264700 Sobic001G161601--Sobic003G043700 Sobic001G161601--Sobic001G161500 Sobic001G161601--Sobic002G350700 Sobic001G161601--Sobic001G059700 Sobic001G161601--Sobic010G085800 Sobic004G318700 Sobic004G318700 Sobic001G161601--Sobic004G318700 Sobic001G161601--Sobic009G232100 Sobic001G161601--Sobic001G112100 Sobic001G161601--Sobic002G213600 Sobic001G084100 Sobic001G084100 Sobic002G270000--Sobic001G084100 Sobic002G128800 Sobic002G128800 Sobic002G270000--Sobic002G128800 Sobic010G238800 Sobic010G238800 Sobic002G270000--Sobic010G238800 Sobic001G063500 Sobic001G063500 Sobic002G270000--Sobic001G063500 Sobic009G215000 Sobic009G215000 Sobic002G270000--Sobic009G215000 Sobic002G252000 Sobic002G252000 Sobic002G270000--Sobic002G252000 Sobic006G156000 Sobic006G156000 Sobic002G270000--Sobic006G156000 Sobic002G270000--Sobic002G396400 Sobic010G052200 Sobic010G052200 Sobic002G270000--Sobic010G052200 Sobic003G347900--Sobic006G057200 Sobic007G198000 Sobic007G198000 Sobic003G347900--Sobic007G198000 Sobic001G313200 Sobic001G313200 Sobic003G347900--Sobic001G313200 Sobic001G529400 Sobic001G529400 Sobic003G347900--Sobic001G529400 Sobic006G191800 Sobic006G191800 Sobic003G347900--Sobic006G191800 Sobic002G276000 Sobic002G276000 Sobic003G347900--Sobic002G276000 Sobic010G047100 Sobic010G047100 Sobic003G347900--Sobic010G047100 Sobic003G078200 Sobic003G078200 Sobic003G347900--Sobic003G078200 Sobic003G057100 Sobic003G057100 Sobic003G347900--Sobic003G057100 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic009G181800 Sobic009G181800 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100
Octagon: transcription factors


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