Gene annotation
Transcriptome id Sobic.002G349300.1
Synonym Sb02g037180
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
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UniProt -
Pfam -
Panther DB PTHR34114 PTHR34114:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G349300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
2 Sobic.001G513100 LYR motif containing protein, putative, expressed -
3 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.003G395500 expressed protein -
5 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.006G176100 expressed protein -
7 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
9 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
10 Sobic.002G366700 expressed protein -
11 Sobic.010G014300 expressed protein -
12 Sobic.010G162400 reticuline oxidase-like protein precursor, putative, expressed -
13 Sobic.005G184100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.001G293400 zinc finger, C3HC4 type domain containing protein, expressed K10663: E3 ubiquitin-protein ligase ATL4
15 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
16 Sobic.001G532300 hydrolase, alpha/beta fold family protein, putative, expressed -
17 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
19 Sobic.002G339400 expressed protein -
20 Sobic.007G149900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G349300 Sobic002G349300 Sobic003G008300 Sobic003G008300 Sobic002G349300--Sobic003G008300 Sobic001G513100 Sobic001G513100 Sobic002G349300--Sobic001G513100 Sobic004G288400 Sobic004G288400 Sobic002G349300--Sobic004G288400 Sobic003G395500 Sobic003G395500 Sobic002G349300--Sobic003G395500 Sobic006G166700 Sobic006G166700 Sobic002G349300--Sobic006G166700 Sobic006G176100 Sobic006G176100 Sobic002G349300--Sobic006G176100 Sobic005G198300 Sobic005G198300 Sobic002G349300--Sobic005G198300 Sobic002G046700 Sobic002G046700 Sobic002G349300--Sobic002G046700 Sobic002G199100 Sobic002G199100 Sobic002G349300--Sobic002G199100 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic003G008300--Sobic002G366700 Sobic003G118900 Sobic003G118900 Sobic003G008300--Sobic003G118900 Sobic003G008300--Sobic002G349300 Sobic003G008300--Sobic002G046700 Sobic002G339400 Sobic002G339400 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900 Sobic001G513100--Sobic002G366700 Sobic001G513100--Sobic003G008300 Sobic001G513100--Sobic002G058600 Sobic001G513100--Sobic002G339400 Sobic001G494150 Sobic001G494150 Sobic001G513100--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic001G513100--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic001G513100--Sobic001G428700 Sobic001G513100--Sobic003G118900 Sobic004G180600 Sobic004G180600 Sobic001G513100--Sobic004G180600 Sobic004G288400--Sobic006G166700 Sobic010G014300 Sobic010G014300 Sobic004G288400--Sobic010G014300 Sobic004G288400--Sobic005G198300 Sobic001G239400 Sobic001G239400 Sobic004G288400--Sobic001G239400 Sobic004G288400--Sobic002G339400 Sobic004G288400--Sobic010G087200 Sobic004G288400--Sobic001G428700 Sobic007G133600 Sobic007G133600 Sobic004G288400--Sobic007G133600 Sobic001G005000 Sobic001G005000 Sobic004G288400--Sobic001G005000 Sobic007G172300 Sobic007G172300 Sobic003G395500--Sobic007G172300 Sobic009G015000 Sobic009G015000 Sobic003G395500--Sobic009G015000 Sobic004G099500 Sobic004G099500 Sobic003G395500--Sobic004G099500 Sobic004G259700 Sobic004G259700 Sobic003G395500--Sobic004G259700 Sobic003G187100 Sobic003G187100 Sobic003G395500--Sobic003G187100 Sobic003G395500--Sobic001G239400 Sobic002G005400 Sobic002G005400 Sobic003G395500--Sobic002G005400 Sobic003G395500--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic003G395500--Sobic006G003000 Sobic006G166700--Sobic010G014300 Sobic006G166700--Sobic001G005000 Sobic006G166700--Sobic010G087200 Sobic002G001300 Sobic002G001300 Sobic006G166700--Sobic002G001300 Sobic006G166700--Sobic004G288400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic006G166700--Sobic009G076800 Sobic005G184100 Sobic005G184100 Sobic006G176100--Sobic005G184100 Sobic006G176100--Sobic002G046700 Sobic002G283800 Sobic002G283800 Sobic006G176100--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic006G176100--Sobic001G516800 Sobic010G136900 Sobic010G136900 Sobic006G176100--Sobic010G136900 Sobic001G161300 Sobic001G161300 Sobic006G176100--Sobic001G161300 Sobic002G334500 Sobic002G334500 Sobic006G176100--Sobic002G334500 Sobic004G033900 Sobic004G033900 Sobic006G176100--Sobic004G033900 Sobic010G171400 Sobic010G171400 Sobic006G176100--Sobic010G171400 Sobic009G123000 Sobic009G123000 Sobic005G198300--Sobic009G123000 Sobic005G198300--Sobic006G003000 Sobic005G198300--Sobic004G288400 Sobic003G127600 Sobic003G127600 Sobic005G198300--Sobic003G127600 Sobic005G198300--Sobic006G166700 Sobic001G148600 Sobic001G148600 Sobic005G198300--Sobic001G148600 Sobic005G198300--Sobic010G014300 Sobic001G416800 Sobic001G416800 Sobic005G198300--Sobic001G416800 Sobic005G198300--Sobic010G087200 Sobic002G046700--Sobic006G176100 Sobic002G046700--Sobic010G171400 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic007G022200 Sobic007G022200 Sobic002G046700--Sobic007G022200 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic002G046700--Sobic003G008300 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic002G199100--Sobic007G022200 Sobic002G199100--Sobic010G171400 Sobic002G199100--Sobic002G046700 Sobic001G172800 Sobic001G172800 Sobic002G199100--Sobic001G172800 Sobic002G273100 Sobic002G273100 Sobic002G199100--Sobic002G273100 Sobic007G046400 Sobic007G046400 Sobic002G199100--Sobic007G046400 Sobic002G199100--Sobic004G307700 Sobic006G241900 Sobic006G241900 Sobic002G199100--Sobic006G241900
Octagon: transcription factors


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