Gene annotation
Transcriptome id Sobic.003G032800.1
Synonym
Functional annotation -
UniProt A0A1B6Q132
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G032800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G258800 OsFBX206 - F-box domain containing protein, expressed -
2 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
3 Sobic.007G022200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
5 Sobic.008G112500 zinc finger family protein, putative, expressed -
6 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
7 Sobic.001G171500 presenilin, putative, expressed K04505: PSEN1, presenilin 1
8 Sobic.004G172600 tetratricopeptide repeat containing protein, putative, expressed -
9 Sobic.003G381300 expressed protein -
10 Sobic.003G260800 expressed protein -
11 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
12 Sobic.003G206800 DUF538 domain containing protein, putative, expressed -
13 Sobic.004G339600 ankyrin repeat domain containing protein, expressed -
14 Sobic.003G257600 transcription initiation factor TFIID subunit 11, putative, expressed K03135: transcription initiation factor TFIID subunit 11
15 Sobic.002G048800 expressed protein -
16 Sobic.008G142600 amino acid permease family protein, putative, expressed -
17 Sobic.004G092000 expressed protein -
18 Sobic.003G044100 60S ribosomal protein L18a-1, putative, expressed -
19 Sobic.001G513100 LYR motif containing protein, putative, expressed -
20 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29


Gene co-expression network
sample Sobic003G032800 Sobic003G032800 Sobic010G258800 Sobic010G258800 Sobic003G032800--Sobic010G258800 Sobic002G046700 Sobic002G046700 Sobic003G032800--Sobic002G046700 Sobic007G022200 Sobic007G022200 Sobic003G032800--Sobic007G022200 Sobic003G008300 Sobic003G008300 Sobic003G032800--Sobic003G008300 Sobic008G112500 Sobic008G112500 Sobic003G032800--Sobic008G112500 Sobic002G199100 Sobic002G199100 Sobic003G032800--Sobic002G199100 Sobic001G171500 Sobic001G171500 Sobic003G032800--Sobic001G171500 Sobic004G172600 Sobic004G172600 Sobic003G032800--Sobic004G172600 Sobic003G381300 Sobic003G381300 Sobic003G032800--Sobic003G381300 Sobic007G013300 Sobic007G013300 Sobic010G258800--Sobic007G013300 Sobic003G257600 Sobic003G257600 Sobic010G258800--Sobic003G257600 Sobic005G164500 Sobic005G164500 Sobic010G258800--Sobic005G164500 Sobic009G031200 Sobic009G031200 Sobic010G258800--Sobic009G031200 Sobic002G372700 Sobic002G372700 Sobic010G258800--Sobic002G372700 Sobic004G083000 Sobic004G083000 Sobic010G258800--Sobic004G083000 Sobic006G207500 Sobic006G207500 Sobic010G258800--Sobic006G207500 Sobic002G412800 Sobic002G412800 Sobic010G258800--Sobic002G412800 Sobic009G101300 Sobic009G101300 Sobic010G258800--Sobic009G101300 Sobic006G176100 Sobic006G176100 Sobic002G046700--Sobic006G176100 Sobic010G171400 Sobic010G171400 Sobic002G046700--Sobic010G171400 Sobic002G334500 Sobic002G334500 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic002G046700--Sobic007G022200 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic002G046700--Sobic003G008300 Sobic007G022200--Sobic009G153200 Sobic007G022200--Sobic002G199100 Sobic007G022200--Sobic002G046700 Sobic005G052000 Sobic005G052000 Sobic007G022200--Sobic005G052000 Sobic002G001800 Sobic002G001800 Sobic007G022200--Sobic002G001800 Sobic004G063200 Sobic004G063200 Sobic007G022200--Sobic004G063200 Sobic001G310800 Sobic001G310800 Sobic007G022200--Sobic001G310800 Sobic007G022200--Sobic010G171400 Sobic004G033900 Sobic004G033900 Sobic007G022200--Sobic004G033900 Sobic001G513100 Sobic001G513100 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic003G008300--Sobic002G366700 Sobic003G118900 Sobic003G118900 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic003G008300--Sobic002G046700 Sobic002G339400 Sobic002G339400 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900 Sobic002G002700 Sobic002G002700 Sobic008G112500--Sobic002G002700 Sobic008G112500--Sobic006G176100 Sobic009G214800 Sobic009G214800 Sobic008G112500--Sobic009G214800 Sobic007G046400 Sobic007G046400 Sobic008G112500--Sobic007G046400 Sobic008G112500--Sobic003G032800 Sobic010G115900 Sobic010G115900 Sobic008G112500--Sobic010G115900 Sobic007G222800 Sobic007G222800 Sobic008G112500--Sobic007G222800 Sobic001G280400 Sobic001G280400 Sobic008G112500--Sobic001G280400 Sobic010G185600 Sobic010G185600 Sobic008G112500--Sobic010G185600 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic002G199100--Sobic007G022200 Sobic002G199100--Sobic010G171400 Sobic002G199100--Sobic002G046700 Sobic001G172800 Sobic001G172800 Sobic002G199100--Sobic001G172800 Sobic002G273100 Sobic002G273100 Sobic002G199100--Sobic002G273100 Sobic002G199100--Sobic007G046400 Sobic002G199100--Sobic004G307700 Sobic006G241900 Sobic006G241900 Sobic002G199100--Sobic006G241900 Sobic004G018200 Sobic004G018200 Sobic001G171500--Sobic004G018200 Sobic001G171500--Sobic002G372700 Sobic004G210101 Sobic004G210101 Sobic001G171500--Sobic004G210101 Sobic002G427700 Sobic002G427700 Sobic001G171500--Sobic002G427700 Sobic004G339600 Sobic004G339600 Sobic001G171500--Sobic004G339600 Sobic007G019501 Sobic007G019501 Sobic001G171500--Sobic007G019501 Sobic001G171500--Sobic004G172600 Sobic009G077700 Sobic009G077700 Sobic001G171500--Sobic009G077700 Sobic002G259400 Sobic002G259400 Sobic001G171500--Sobic002G259400 Sobic003G054100 Sobic003G054100 Sobic004G172600--Sobic003G054100 Sobic009G228300 Sobic009G228300 Sobic004G172600--Sobic009G228300 Sobic005G034600 Sobic005G034600 Sobic004G172600--Sobic005G034600 Sobic001G072900 Sobic001G072900 Sobic004G172600--Sobic001G072900 Sobic009G243900 Sobic009G243900 Sobic004G172600--Sobic009G243900 Sobic004G172600--Sobic001G171500 Sobic001G487000 Sobic001G487000 Sobic004G172600--Sobic001G487000 Sobic004G172600--Sobic001G513100 Sobic001G150800 Sobic001G150800 Sobic004G172600--Sobic001G150800 Sobic006G216900 Sobic006G216900 Sobic003G381300--Sobic006G216900 Sobic010G080300 Sobic010G080300 Sobic003G381300--Sobic010G080300 Sobic010G231100 Sobic010G231100 Sobic003G381300--Sobic010G231100 Sobic002G142066 Sobic002G142066 Sobic003G381300--Sobic002G142066 Sobic002G163700 Sobic002G163700 Sobic003G381300--Sobic002G163700 Sobic009G036300 Sobic009G036300 Sobic003G381300--Sobic009G036300 Sobic001G416300 Sobic001G416300 Sobic003G381300--Sobic001G416300 Sobic009G004800 Sobic009G004800 Sobic003G381300--Sobic009G004800 Sobic001G341800 Sobic001G341800 Sobic003G381300--Sobic001G341800
Octagon: transcription factors


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