Gene annotation
Transcriptome id Sobic.010G258800.2,Sobic.010G258800.1
Synonym Sb10g029550
Functional annotation OsFBX206 - F-box domain containing protein, expressed
UniProt A0A194YLH9 , A0A194YLG5
Pfam PF12937
Panther DB PTHR22990
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G45360 : F-box family protein
RAP-DB (Rice) LOC_Os06g49530.1 : OsFBX206 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018440
Brachypodium KQK17496 , KQK17497
Barley HORVU7Hr1G095390.2 , HORVU7Hr1G095390.1 , HORVU7Hr1G095400.6 , HORVU7Hr1G095400.5 , HORVU7Hr1G095400.4 , HORVU7Hr1G095400.3 , HORVU7Hr1G095400.2 , HORVU7Hr1G095400.1
Wheat TraesCS7B02G308300 , TraesCS7B02G308300 , TraesCS7B02G308300 , TraesCS7B02G308300 , TraesCS7B02G308300 , TraesCS7D02G401900 , TraesCS7D02G401900 , TraesCS7D02G401900 , TraesCS7D02G401900 , TraesCS7D02G401900 , TraesCS7A02G408600 , TraesCS7A02G408600 , TraesCS7A02G408600
Populus PNT42878


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cDNA sequences
Sobic.010G258800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G013300 protein kinase family protein, putative, expressed -
2 Sobic.003G257600 transcription initiation factor TFIID subunit 11, putative, expressed K03135: transcription initiation factor TFIID subunit 11
3 Sobic.005G164500 expressed protein -
4 Sobic.009G031200 expressed protein -
5 Sobic.002G372700 DGCR14, putative, expressed K13118: protein DGCR14
6 Sobic.004G083000 CRAL/TRIO domain containing protein, expressed -
7 Sobic.006G207500 expressed protein -
8 Sobic.002G412800 stress-related protein, putative, expressed -
9 Sobic.009G101300 phox domain-containing protein, putative, expressed -
10 Sobic.003G032800 - -
11 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
12 Sobic.003G402600 ubiquitin family domain containing protein, expressed K12160: SUMO, small ubiquitin-related modifier
13 Sobic.001G408100 Yip1 domain containing protein, expressed -
14 Sobic.010G101500 skp1 family, tetramerisation domain containing protein, expressed K03872: ELOC, elongin-C
15 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
16 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
17 Sobic.002G058700 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
18 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
19 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
20 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin


Gene co-expression network
sample Sobic010G258800 Sobic010G258800 Sobic007G013300 Sobic007G013300 Sobic010G258800--Sobic007G013300 Sobic003G257600 Sobic003G257600 Sobic010G258800--Sobic003G257600 Sobic005G164500 Sobic005G164500 Sobic010G258800--Sobic005G164500 Sobic009G031200 Sobic009G031200 Sobic010G258800--Sobic009G031200 Sobic002G372700 Sobic002G372700 Sobic010G258800--Sobic002G372700 Sobic004G083000 Sobic004G083000 Sobic010G258800--Sobic004G083000 Sobic006G207500 Sobic006G207500 Sobic010G258800--Sobic006G207500 Sobic002G412800 Sobic002G412800 Sobic010G258800--Sobic002G412800 Sobic009G101300 Sobic009G101300 Sobic010G258800--Sobic009G101300 Sobic005G074100 Sobic005G074100 Sobic007G013300--Sobic005G074100 Sobic001G206900 Sobic001G206900 Sobic007G013300--Sobic001G206900 Sobic001G145500 Sobic001G145500 Sobic007G013300--Sobic001G145500 Sobic002G058700 Sobic002G058700 Sobic007G013300--Sobic002G058700 Sobic003G299000 Sobic003G299000 Sobic007G013300--Sobic003G299000 Sobic004G010900 Sobic004G010900 Sobic007G013300--Sobic004G010900 Sobic009G149500 Sobic009G149500 Sobic007G013300--Sobic009G149500 Sobic004G082900 Sobic004G082900 Sobic007G013300--Sobic004G082900 Sobic002G342500 Sobic002G342500 Sobic007G013300--Sobic002G342500 Sobic003G257600--Sobic002G372700 Sobic003G117300 Sobic003G117300 Sobic003G257600--Sobic003G117300 Sobic001G501200 Sobic001G501200 Sobic003G257600--Sobic001G501200 Sobic004G060600 Sobic004G060600 Sobic003G257600--Sobic004G060600 Sobic009G131100 Sobic009G131100 Sobic003G257600--Sobic009G131100 Sobic002G400000 Sobic002G400000 Sobic003G257600--Sobic002G400000 Sobic006G054500 Sobic006G054500 Sobic003G257600--Sobic006G054500 Sobic001G428100 Sobic001G428100 Sobic003G257600--Sobic001G428100 Sobic009G004600 Sobic009G004600 Sobic003G257600--Sobic009G004600 Sobic001G280400 Sobic001G280400 Sobic005G164500--Sobic001G280400 Sobic004G027000 Sobic004G027000 Sobic005G164500--Sobic004G027000 Sobic004G117800 Sobic004G117800 Sobic005G164500--Sobic004G117800 Sobic005G164500--Sobic007G013300 Sobic010G085200 Sobic010G085200 Sobic005G164500--Sobic010G085200 Sobic002G394800 Sobic002G394800 Sobic005G164500--Sobic002G394800 Sobic001G469200 Sobic001G469200 Sobic005G164500--Sobic001G469200 Sobic005G164500--Sobic002G058700 Sobic001G426100 Sobic001G426100 Sobic005G164500--Sobic001G426100 Sobic009G031200--Sobic006G207500 Sobic003G116600 Sobic003G116600 Sobic009G031200--Sobic003G116600 Sobic003G052400 Sobic003G052400 Sobic009G031200--Sobic003G052400 Sobic002G348600 Sobic002G348600 Sobic009G031200--Sobic002G348600 Sobic010G026300 Sobic010G026300 Sobic009G031200--Sobic010G026300 Sobic010G045833 Sobic010G045833 Sobic009G031200--Sobic010G045833 Sobic001G105100 Sobic001G105100 Sobic009G031200--Sobic001G105100 Sobic007G097900 Sobic007G097900 Sobic009G031200--Sobic007G097900 Sobic005G010500 Sobic005G010500 Sobic009G031200--Sobic005G010500 Sobic007G203700 Sobic007G203700 Sobic002G372700--Sobic007G203700 Sobic001G041100 Sobic001G041100 Sobic002G372700--Sobic001G041100 Sobic010G065400 Sobic010G065400 Sobic002G372700--Sobic010G065400 Sobic008G137600 Sobic008G137600 Sobic002G372700--Sobic008G137600 Sobic010G047400 Sobic010G047400 Sobic002G372700--Sobic010G047400 Sobic006G220700 Sobic006G220700 Sobic002G372700--Sobic006G220700 Sobic002G372700--Sobic003G257600 Sobic003G021200 Sobic003G021200 Sobic002G372700--Sobic003G021200 Sobic002G398800 Sobic002G398800 Sobic002G372700--Sobic002G398800 Sobic008G058700 Sobic008G058700 Sobic004G083000--Sobic008G058700 Sobic003G189700 Sobic003G189700 Sobic004G083000--Sobic003G189700 Sobic003G043400 Sobic003G043400 Sobic004G083000--Sobic003G043400 Sobic010G017000 Sobic010G017000 Sobic004G083000--Sobic010G017000 Sobic001G311100 Sobic001G311100 Sobic004G083000--Sobic001G311100 Sobic009G160200 Sobic009G160200 Sobic004G083000--Sobic009G160200 Sobic006G217700 Sobic006G217700 Sobic004G083000--Sobic006G217700 Sobic003G092700 Sobic003G092700 Sobic004G083000--Sobic003G092700 Sobic002G134400 Sobic002G134400 Sobic004G083000--Sobic002G134400 Sobic010G267500 Sobic010G267500 Sobic006G207500--Sobic010G267500 Sobic006G207500--Sobic010G065400 Sobic006G207500--Sobic009G031200 Sobic006G183000 Sobic006G183000 Sobic006G207500--Sobic006G183000 Sobic006G222400 Sobic006G222400 Sobic006G207500--Sobic006G222400 Sobic006G207500--Sobic007G097900 Sobic006G207500--Sobic003G052400 Sobic001G061700 Sobic001G061700 Sobic006G207500--Sobic001G061700 Sobic006G207500--Sobic008G137600 Sobic003G369500 Sobic003G369500 Sobic002G412800--Sobic003G369500 Sobic002G343300 Sobic002G343300 Sobic002G412800--Sobic002G343300 Sobic002G412800--Sobic010G267500 Sobic004G259500 Sobic004G259500 Sobic002G412800--Sobic004G259500 Sobic009G135900 Sobic009G135900 Sobic002G412800--Sobic009G135900 Sobic007G006600 Sobic007G006600 Sobic002G412800--Sobic007G006600 Sobic001G417900 Sobic001G417900 Sobic002G412800--Sobic001G417900 Sobic001G128100 Sobic001G128100 Sobic002G412800--Sobic001G128100 Sobic006G178000 Sobic006G178000 Sobic002G412800--Sobic006G178000 Sobic009G101300--Sobic002G058700 Sobic001G096000 Sobic001G096000 Sobic009G101300--Sobic001G096000 Sobic001G015800 Sobic001G015800 Sobic009G101300--Sobic001G015800 Sobic008G124900 Sobic008G124900 Sobic009G101300--Sobic008G124900 Sobic009G131900 Sobic009G131900 Sobic009G101300--Sobic009G131900 Sobic001G420800 Sobic001G420800 Sobic009G101300--Sobic001G420800 Sobic003G104000 Sobic003G104000 Sobic009G101300--Sobic003G104000 Sobic009G101300--Sobic001G206900 Sobic007G180600 Sobic007G180600 Sobic009G101300--Sobic007G180600
Octagon: transcription factors


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