Gene annotation
Transcriptome id Sobic.004G083000.2,Sobic.004G083000.1
Synonym Sb04g006840
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5XXK4 , A0A1Z5RMH5
Pfam PF03765 PF00650
Panther DB PTHR23324 PTHR23324:SF79
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55840 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os02g10650.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019569 , Zm00025a034636
Brachypodium PNT66113 , KQJ93903
Barley HORVU6Hr1G032510.28 , HORVU6Hr1G032510.29 , HORVU6Hr1G032510.26 , HORVU6Hr1G032510.27 , HORVU6Hr1G032510.24 , HORVU6Hr1G032510.25 , HORVU6Hr1G032510.22 , HORVU6Hr1G032510.23 , HORVU6Hr1G032510.20 , HORVU6Hr1G032510.21 , HORVU6Hr1G032510.17 , HORVU6Hr1G032510.16 , HORVU6Hr1G032510.15 , HORVU6Hr1G032510.14 , HORVU6Hr1G032510.13 , HORVU6Hr1G032510.12 , HORVU6Hr1G032510.11 , HORVU6Hr1G032510.10 , HORVU6Hr1G032510.19 , HORVU6Hr1G032510.18 , HORVU6Hr1G032510.9 , HORVU6Hr1G032510.8 , HORVU6Hr1G032510.7 , HORVU6Hr1G032510.6 , HORVU6Hr1G032510.5 , HORVU6Hr1G032510.4 , HORVU6Hr1G032510.3 , HORVU6Hr1G032510.2 , HORVU6Hr1G032510.1
Wheat TraesCS6A02G164200 , TraesCS6B02G188100 , TraesCS6D02G149100
Populus -


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cDNA sequences
Sobic.004G083000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G058700 metal cation transporter, putative, expressed -
2 Sobic.003G189700 thioredoxin, putative, expressed -
3 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
4 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
5 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
6 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
7 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
8 Sobic.003G092700 xylosyltransferase, putative, expressed -
9 Sobic.002G134400 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
10 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
12 Sobic.002G261900 arabinogalactan protein, putative, expressed -
13 Sobic.001G408100 Yip1 domain containing protein, expressed -
14 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
15 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
16 Sobic.001G415000 expressed protein -
17 Sobic.004G039300 phosphatidate cytidylyltransferase family protein, putative, expressed K00902: dolichol kinase
18 Sobic.010G094600 zinc finger, C3HC4 type, domain containing protein, expressed -
19 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -
20 Sobic.001G441000 erwinia induced protein 2, putative, expressed -


Gene co-expression network
sample Sobic004G083000 Sobic004G083000 Sobic008G058700 Sobic008G058700 Sobic004G083000--Sobic008G058700 Sobic003G189700 Sobic003G189700 Sobic004G083000--Sobic003G189700 Sobic003G043400 Sobic003G043400 Sobic004G083000--Sobic003G043400 Sobic010G017000 Sobic010G017000 Sobic004G083000--Sobic010G017000 Sobic001G311100 Sobic001G311100 Sobic004G083000--Sobic001G311100 Sobic009G160200 Sobic009G160200 Sobic004G083000--Sobic009G160200 Sobic006G217700 Sobic006G217700 Sobic004G083000--Sobic006G217700 Sobic003G092700 Sobic003G092700 Sobic004G083000--Sobic003G092700 Sobic002G134400 Sobic002G134400 Sobic004G083000--Sobic002G134400 Sobic003G410400 Sobic003G410400 Sobic008G058700--Sobic003G410400 Sobic008G058700--Sobic004G083000 Sobic003G126800 Sobic003G126800 Sobic008G058700--Sobic003G126800 Sobic003G252900 Sobic003G252900 Sobic008G058700--Sobic003G252900 Sobic009G070200 Sobic009G070200 Sobic008G058700--Sobic009G070200 Sobic008G058700--Sobic003G043400 Sobic002G044000 Sobic002G044000 Sobic008G058700--Sobic002G044000 Sobic003G358300 Sobic003G358300 Sobic008G058700--Sobic003G358300 Sobic008G058700--Sobic009G160200 Sobic003G189700--Sobic010G017000 Sobic003G189700--Sobic004G083000 Sobic003G189700--Sobic009G160200 Sobic003G189700--Sobic006G217700 Sobic002G236200 Sobic002G236200 Sobic003G189700--Sobic002G236200 Sobic002G395600 Sobic002G395600 Sobic003G189700--Sobic002G395600 Sobic002G121000 Sobic002G121000 Sobic003G189700--Sobic002G121000 Sobic003G038600 Sobic003G038600 Sobic003G189700--Sobic003G038600 Sobic010G238700 Sobic010G238700 Sobic003G189700--Sobic010G238700 Sobic002G423800 Sobic002G423800 Sobic003G043400--Sobic002G423800 Sobic001G010700 Sobic001G010700 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic004G335000 Sobic004G335000 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic010G017000--Sobic006G222400 Sobic010G017000--Sobic006G217700 Sobic003G021200 Sobic003G021200 Sobic010G017000--Sobic003G021200 Sobic003G052400 Sobic003G052400 Sobic010G017000--Sobic003G052400 Sobic010G017000--Sobic009G160200 Sobic010G017000--Sobic003G038600 Sobic007G059900 Sobic007G059900 Sobic010G017000--Sobic007G059900 Sobic001G283500 Sobic001G283500 Sobic010G017000--Sobic001G283500 Sobic009G008600 Sobic009G008600 Sobic010G017000--Sobic009G008600 Sobic001G311100--Sobic002G261900 Sobic010G094600 Sobic010G094600 Sobic001G311100--Sobic010G094600 Sobic001G311100--Sobic009G160200 Sobic001G311100--Sobic003G043400 Sobic010G026700 Sobic010G026700 Sobic001G311100--Sobic010G026700 Sobic001G311100--Sobic001G283500 Sobic010G188100 Sobic010G188100 Sobic001G311100--Sobic010G188100 Sobic001G311100--Sobic010G017000 Sobic002G083266 Sobic002G083266 Sobic001G311100--Sobic002G083266 Sobic009G160200--Sobic001G283500 Sobic009G160200--Sobic006G222400 Sobic009G160200--Sobic001G311100 Sobic009G160200--Sobic010G017000 Sobic003G217100 Sobic003G217100 Sobic009G160200--Sobic003G217100 Sobic009G160200--Sobic002G261900 Sobic009G160200--Sobic010G094600 Sobic009G160200--Sobic003G043400 Sobic009G160200--Sobic003G052400 Sobic006G217700--Sobic010G017000 Sobic009G238800 Sobic009G238800 Sobic006G217700--Sobic009G238800 Sobic001G323000 Sobic001G323000 Sobic006G217700--Sobic001G323000 Sobic010G016400 Sobic010G016400 Sobic006G217700--Sobic010G016400 Sobic004G054300 Sobic004G054300 Sobic006G217700--Sobic004G054300 Sobic004G132300 Sobic004G132300 Sobic006G217700--Sobic004G132300 Sobic001G057800 Sobic001G057800 Sobic006G217700--Sobic001G057800 Sobic001G033500 Sobic001G033500 Sobic006G217700--Sobic001G033500 Sobic007G148800 Sobic007G148800 Sobic006G217700--Sobic007G148800 Sobic003G319000 Sobic003G319000 Sobic003G092700--Sobic003G319000 Sobic003G312400 Sobic003G312400 Sobic003G092700--Sobic003G312400 Sobic002G141700 Sobic002G141700 Sobic003G092700--Sobic002G141700 Sobic001G145500 Sobic001G145500 Sobic003G092700--Sobic001G145500 Sobic001G542900 Sobic001G542900 Sobic003G092700--Sobic001G542900 Sobic003G092700--Sobic004G083000 Sobic006G252200 Sobic006G252200 Sobic003G092700--Sobic006G252200 Sobic010G088300 Sobic010G088300 Sobic003G092700--Sobic010G088300 Sobic002G194800 Sobic002G194800 Sobic003G092700--Sobic002G194800 Sobic002G134400--Sobic001G311100 Sobic001G085900 Sobic001G085900 Sobic002G134400--Sobic001G085900 Sobic002G134400--Sobic010G094600 Sobic002G134400--Sobic002G261900 Sobic002G134400--Sobic002G083266 Sobic002G134400--Sobic004G083000 Sobic001G298300 Sobic001G298300 Sobic002G134400--Sobic001G298300 Sobic001G289400 Sobic001G289400 Sobic002G134400--Sobic001G289400 Sobic007G006700 Sobic007G006700 Sobic002G134400--Sobic007G006700
Octagon: transcription factors


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