Gene annotation
Transcriptome id Sobic.007G225300.2,Sobic.007G225300.1,Sobic.007G225300.4,Sobic.007G225300.3
Synonym Sb07g029040
Functional annotation 2-nitropropane dioxygenase family, putative, expressed
UniProt A0A1B6PJ81 , A0A1Z5RC24 , A0A1Z5RB92 , A0A1B6PJ82
Pfam PF01070 PF03060 PF03060
Panther DB PTHR32332 PTHR32332:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0018580; nitronate monooxygenase activity GO:0016491oxidoreductase activity GO:0018580nitronate monooxygenase activity


Orthologs (automatic annotation)
TAIR AT5G64250 : Aldolase-type TIM barrel family protein
RAP-DB (Rice) LOC_Os08g37874.1 : 2-nitropropane dioxygenase family, putative, expressed
MaizeGDB (Corn) Zm00025a004953
Brachypodium KQJ98736
Barley HORVU1Hr1G057460.1 , HORVU1Hr1G057460.3 , HORVU1Hr1G057460.5 , HORVU1Hr1G057460.7 , HORVU1Hr1G057460.6 , HORVU1Hr1G057460.9 , HORVU1Hr1G057460.8
Wheat TraesCS1D02G238900 , TraesCS1A02G238700 , TraesCS1A02G235800 , TraesCS1B02G250600 , TraesCS1B02G250600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
3 Sobic.003G052400 proline-rich family protein, putative, expressed -
4 Sobic.004G337900 ENTH domain containing protein, expressed K12471: epsin
5 Sobic.007G148700 exo70 exocyst complex subunit, putative, expressed -
6 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -
7 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
8 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
9 Sobic.001G237500 transporter family protein, putative, expressed -
10 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
12 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
13 Sobic.003G414600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
14 Sobic.002G362900 IBS1, putative, expressed -
15 Sobic.004G083000 CRAL/TRIO domain containing protein, expressed -
16 Sobic.001G408100 Yip1 domain containing protein, expressed -
17 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
18 Sobic.003G217100 Yip1 domain containing protein, expressed -
19 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
20 Sobic.008G058700 metal cation transporter, putative, expressed -


Gene co-expression network
sample Sobic007G225300 Sobic007G225300 Sobic003G353400 Sobic003G353400 Sobic007G225300--Sobic003G353400 Sobic005G195600 Sobic005G195600 Sobic007G225300--Sobic005G195600 Sobic003G052400 Sobic003G052400 Sobic007G225300--Sobic003G052400 Sobic004G337900 Sobic004G337900 Sobic007G225300--Sobic004G337900 Sobic007G148700 Sobic007G148700 Sobic007G225300--Sobic007G148700 Sobic009G229300 Sobic009G229300 Sobic007G225300--Sobic009G229300 Sobic009G182200 Sobic009G182200 Sobic007G225300--Sobic009G182200 Sobic003G319000 Sobic003G319000 Sobic007G225300--Sobic003G319000 Sobic001G237500 Sobic001G237500 Sobic007G225300--Sobic001G237500 Sobic003G353400--Sobic004G337900 Sobic001G099100 Sobic001G099100 Sobic003G353400--Sobic001G099100 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic006G191100 Sobic006G191100 Sobic005G195600--Sobic006G191100 Sobic006G076201 Sobic006G076201 Sobic005G195600--Sobic006G076201 Sobic006G064800 Sobic006G064800 Sobic005G195600--Sobic006G064800 Sobic006G087900 Sobic006G087900 Sobic005G195600--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic005G195600--Sobic003G278700 Sobic002G325900 Sobic002G325900 Sobic005G195600--Sobic002G325900 Sobic004G172100 Sobic004G172100 Sobic005G195600--Sobic004G172100 Sobic004G145200 Sobic004G145200 Sobic005G195600--Sobic004G145200 Sobic005G195600--Sobic007G225300 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G217100 Sobic003G217100 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic003G052400--Sobic001G237500 Sobic004G337900--Sobic003G353400 Sobic001G450800 Sobic001G450800 Sobic004G337900--Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic004G337900--Sobic003G361300 Sobic004G337900--Sobic003G278700 Sobic003G198200 Sobic003G198200 Sobic004G337900--Sobic003G198200 Sobic003G198150 Sobic003G198150 Sobic004G337900--Sobic003G198150 Sobic001G157400 Sobic001G157400 Sobic004G337900--Sobic001G157400 Sobic004G337900--Sobic009G229300 Sobic009G099000 Sobic009G099000 Sobic004G337900--Sobic009G099000 Sobic006G217700 Sobic006G217700 Sobic007G148700--Sobic006G217700 Sobic010G016400 Sobic010G016400 Sobic007G148700--Sobic010G016400 Sobic007G148800 Sobic007G148800 Sobic007G148700--Sobic007G148800 Sobic003G321300 Sobic003G321300 Sobic007G148700--Sobic003G321300 Sobic007G148700--Sobic003G052400 Sobic007G148700--Sobic010G017000 Sobic007G148700--Sobic001G237500 Sobic001G403700 Sobic001G403700 Sobic007G148700--Sobic001G403700 Sobic009G238800 Sobic009G238800 Sobic007G148700--Sobic009G238800 Sobic009G229300--Sobic008G003600 Sobic001G512000 Sobic001G512000 Sobic009G229300--Sobic001G512000 Sobic001G230100 Sobic001G230100 Sobic009G229300--Sobic001G230100 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic009G182200--Sobic003G319000 Sobic009G171100 Sobic009G171100 Sobic009G182200--Sobic009G171100 Sobic009G182200--Sobic003G217100 Sobic003G348200 Sobic003G348200 Sobic009G182200--Sobic003G348200 Sobic010G201388 Sobic010G201388 Sobic009G182200--Sobic010G201388 Sobic001G441000 Sobic001G441000 Sobic009G182200--Sobic001G441000 Sobic004G123000 Sobic004G123000 Sobic009G182200--Sobic004G123000 Sobic003G224300 Sobic003G224300 Sobic009G182200--Sobic003G224300 Sobic006G013000 Sobic006G013000 Sobic009G182200--Sobic006G013000 Sobic001G196100 Sobic001G196100 Sobic003G319000--Sobic001G196100 Sobic003G092700 Sobic003G092700 Sobic003G319000--Sobic003G092700 Sobic003G319000--Sobic009G182200 Sobic001G026600 Sobic001G026600 Sobic003G319000--Sobic001G026600 Sobic003G252900 Sobic003G252900 Sobic003G319000--Sobic003G252900 Sobic003G319000--Sobic003G312400 Sobic001G418000 Sobic001G418000 Sobic003G319000--Sobic001G418000 Sobic003G410400 Sobic003G410400 Sobic003G319000--Sobic003G410400 Sobic003G023500 Sobic003G023500 Sobic003G319000--Sobic003G023500 Sobic001G237500--Sobic010G105600 Sobic001G237500--Sobic006G257001 Sobic001G105100 Sobic001G105100 Sobic001G237500--Sobic001G105100 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic004G222600 Sobic004G222600 Sobic001G237500--Sobic004G222600 Sobic001G237500--Sobic002G131900 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300
Octagon: transcription factors


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