Gene annotation
| Transcriptome id | Sobic.004G337900.1 |
|---|---|
| Synonym | Sb04g036550 |
| Functional annotation | ENTH domain containing protein, expressed |
| UniProt | C5XV65 |
| Pfam | PF01417 |
| Panther DB | PTHR12276 |
| NCBI CDD | KOG2056; Equilibrative nucleoside transporter protein |
| KEGG Orthology | K12471; epsin |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G59290 : ENTH/VHS family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g56270.1 : ENTH domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a032867 |
| Brachypodium | KQK01257 , KQK01258 |
| Barley | HORVU6Hr1G088570.5 , HORVU6Hr1G088570.6 , HORVU6Hr1G088570.7 , HORVU6Hr1G088570.1 , HORVU6Hr1G088570.2 , HORVU6Hr1G088570.3 , HORVU6Hr1G088570.8 |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.004G337900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G353400 | DHHC zinc finger domain containing protein, expressed | K18932: palmitoyltransferase |
| 2 | Sobic.001G450800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed | K16055: trehalose 6-phosphate synthase/phosphatase |
| 3 | Sobic.003G361300 | "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 4 | Sobic.003G278700 | heavy metal-associated domain containing protein, expressed | - |
| 5 | Sobic.003G198200 | "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed | K14497: protein phosphatase 2C |
| 6 | Sobic.003G198150 | - | - |
| 7 | Sobic.001G157400 | Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed | K09338: homeobox-leucine zipper protein |
| 8 | Sobic.009G229300 | glycosyltransferase family 43 protein, putative, expressed | - |
| 9 | Sobic.009G099000 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 10 | Sobic.001G460300 | expressed protein | - |
| 11 | Sobic.004G257800 | chloride transporter, chloride channel family, putative, expressed | - |
| 12 | Sobic.010G170400 | "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
| 13 | Sobic.004G353600 | sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed | K15378: solute carrier family 45, member 1/2/4 |
| 14 | Sobic.002G306000 | calmodulin-binding transcription activator 5, putative, expressed | - |
| 15 | Sobic.007G178200 | ER lumen protein retaining receptor, putative, expressed | - |
| 16 | Sobic.005G195600 | adenylyl-sulfate kinase, putative, expressed | K00860: adenylylsulfate kinase |
| 17 | Sobic.007G225300 | 2-nitropropane dioxygenase family, putative, expressed | - |
| 18 | Sobic.009G030200 | homeobox protein knotted-1-like 6, putative, expressed | - |
| 19 | Sobic.003G198400 | - | - |
| 20 | Sobic.001G342600 | PDI, putative, expressed | K17609: nucleoredoxin |
Gene co-expression network
Octagon: transcription factors
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