Gene annotation
Transcriptome id Sobic.001G450800.1
Synonym Sb01g042380, TPS6, ATTPS6
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
trehalose-6-phosphate synthase, putative, expressed
UniProt C5WSM2
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF48
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G68020 : UDP-Glycosyltransferase / trehalose-phosphatase family protein
RAP-DB (Rice) LOC_Os03g12360.2 : trehalose-6-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a050895 , Zm00025a001382 , Zm00025a046894 , Zm00025a032969 , Zm00025a022421
Brachypodium KQK22793 , KQK22795 , KQK22794 , KQK22797 , KQK22796 , PNT77845 , PNT77846
Barley HORVU4Hr1G066510.1 , HORVU4Hr1G066510.2 , HORVU4Hr1G066510.3 , HORVU4Hr1G066510.4 , HORVU4Hr1G066510.5 , HORVU4Hr1G066510.6 , HORVU4Hr1G066510.7 , HORVU0Hr1G028350.1 , HORVU6Hr1G084190.3 , HORVU6Hr1G084190.1 , HORVU5Hr1G060460.6 , HORVU5Hr1G060460.5 , HORVU5Hr1G060460.4 , HORVU5Hr1G060460.3 , HORVU5Hr1G060460.2 , HORVU5Hr1G060460.1 , HORVU5Hr1G033940.1
Wheat TraesCS4D02G239700 , TraesCS6A02G351300 , TraesCS4A02G062900 , TraesCS4A02G062900 , TraesCS4A02G062900 , TraesCS6D02G334000 , TraesCS6D02G334000 , TraesCS5B02G202200 , TraesCS5A02G203500 , TraesCS4B02G239900 , TraesCS6B02G384500
Populus PNT12214 , PNT12215 , PNT12216


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cDNA sequences
Sobic.001G450800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
2 Sobic.001G430700 expressed protein -
3 Sobic.003G198150 - -
4 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
5 Sobic.003G040800 WRKY102, expressed -
6 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.008G044750 - -
8 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
10 Sobic.003G233900 - -
11 Sobic.001G307200 exonuclease, putative, expressed -
12 Sobic.001G509400 - -
13 Sobic.004G257350 - -
14 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
15 Sobic.009G128300 CUE domain containing protein, expressed -
16 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
17 Sobic.002G267800 expressed protein -
18 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
19 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
20 Sobic.002G009900 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic001G450800 Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic001G450800--Sobic003G361300 Sobic001G430700 Sobic001G430700 Sobic001G450800--Sobic001G430700 Sobic003G198150 Sobic003G198150 Sobic001G450800--Sobic003G198150 Sobic001G106000 Sobic001G106000 Sobic001G450800--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic001G450800--Sobic003G040800 Sobic003G227600 Sobic003G227600 Sobic001G450800--Sobic003G227600 Sobic008G044750 Sobic008G044750 Sobic001G450800--Sobic008G044750 Sobic009G216900 Sobic009G216900 Sobic001G450800--Sobic009G216900 Sobic004G285100 Sobic004G285100 Sobic001G450800--Sobic004G285100 Sobic003G361300--Sobic001G450800 Sobic003G361300--Sobic001G430700 Sobic003G361300--Sobic003G198150 Sobic003G361300--Sobic008G044750 Sobic003G361300--Sobic003G227600 Sobic003G361300--Sobic003G040800 Sobic003G361300--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic003G361300--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G361300--Sobic009G128300 Sobic001G430700--Sobic001G450800 Sobic001G430700--Sobic003G361300 Sobic001G430700--Sobic001G106000 Sobic001G430700--Sobic003G040800 Sobic001G430700--Sobic004G285100 Sobic001G430700--Sobic003G233900 Sobic002G267800 Sobic002G267800 Sobic001G430700--Sobic002G267800 Sobic003G141800 Sobic003G141800 Sobic001G430700--Sobic003G141800 Sobic009G000700 Sobic009G000700 Sobic001G430700--Sobic009G000700 Sobic003G198150--Sobic008G044750 Sobic003G198200 Sobic003G198200 Sobic003G198150--Sobic003G198200 Sobic003G198150--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G198150--Sobic003G227600 Sobic004G170032 Sobic004G170032 Sobic003G198150--Sobic004G170032 Sobic003G198150--Sobic003G233900 Sobic003G198150--Sobic001G450800 Sobic001G106000--Sobic003G040800 Sobic003G017200 Sobic003G017200 Sobic001G106000--Sobic003G017200 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G106000--Sobic001G430700 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic002G182800 Sobic002G182800 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic001G075101 Sobic001G075101 Sobic003G227600--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G227600--Sobic002G331450 Sobic008G044750--Sobic001G509400 Sobic008G044750--Sobic009G128300 Sobic008G044750--Sobic003G079800 Sobic008G044750--Sobic002G182800 Sobic008G044750--Sobic003G233900 Sobic008G044750--Sobic003G227600 Sobic008G044750--Sobic003G198150 Sobic003G066900 Sobic003G066900 Sobic008G044750--Sobic003G066900 Sobic008G044750--Sobic001G075101 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic009G216900--Sobic004G285100 Sobic009G216900--Sobic003G079800 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G310600 Sobic004G310600 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G155150 Sobic004G155150 Sobic004G285100--Sobic004G155150
Octagon: transcription factors


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