Gene annotation
Transcriptome id Sobic.001G430700.2,Sobic.001G430700.1
Synonym Sb01g040510
Functional annotation expressed protein
UniProt C5WQS3
Pfam PF04576
Panther DB PTHR31448 PTHR31448:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70750 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os03g15410.1 : expressed protein
MaizeGDB (Corn) Zm00025a052828
Brachypodium -
Barley HORVU4Hr1G061850.1 , HORVU4Hr1G061850.3 , HORVU4Hr1G061850.2 , HORVU4Hr1G061850.4 , HORVU4Hr1G061850.5
Wheat TraesCS4B02G217800 , TraesCS4B02G217800 , TraesCS4A02G086600 , TraesCS4A02G086600 , TraesCS4A02G086600 , TraesCS4A02G086600 , TraesCS4A02G086600 , TraesCS4A02G086600 , TraesCS4D02G218100 , TraesCS4D02G218100 , TraesCS4D02G218100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
2 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
3 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
4 Sobic.003G040800 WRKY102, expressed -
5 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
6 Sobic.003G233900 - -
7 Sobic.002G267800 expressed protein -
8 Sobic.003G141800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed -
9 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
10 Sobic.008G044750 - -
11 Sobic.003G066900 expressed protein -
12 Sobic.001G307200 exonuclease, putative, expressed -
13 Sobic.003G198150 - -
14 Sobic.004G257350 - -
15 Sobic.009G128300 CUE domain containing protein, expressed -
16 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
17 Sobic.003G373150 - -
18 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
19 Sobic.009G253950 - -
20 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G430700 Sobic001G430700 Sobic001G450800 Sobic001G450800 Sobic001G430700--Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic001G430700--Sobic003G361300 Sobic001G106000 Sobic001G106000 Sobic001G430700--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic001G430700--Sobic003G040800 Sobic004G285100 Sobic004G285100 Sobic001G430700--Sobic004G285100 Sobic003G233900 Sobic003G233900 Sobic001G430700--Sobic003G233900 Sobic002G267800 Sobic002G267800 Sobic001G430700--Sobic002G267800 Sobic003G141800 Sobic003G141800 Sobic001G430700--Sobic003G141800 Sobic009G000700 Sobic009G000700 Sobic001G430700--Sobic009G000700 Sobic001G450800--Sobic003G361300 Sobic001G450800--Sobic001G430700 Sobic003G198150 Sobic003G198150 Sobic001G450800--Sobic003G198150 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic003G227600 Sobic003G227600 Sobic001G450800--Sobic003G227600 Sobic008G044750 Sobic008G044750 Sobic001G450800--Sobic008G044750 Sobic009G216900 Sobic009G216900 Sobic001G450800--Sobic009G216900 Sobic001G450800--Sobic004G285100 Sobic003G361300--Sobic001G450800 Sobic003G361300--Sobic001G430700 Sobic003G361300--Sobic003G198150 Sobic003G361300--Sobic008G044750 Sobic003G361300--Sobic003G227600 Sobic003G361300--Sobic003G040800 Sobic003G361300--Sobic009G216900 Sobic003G361300--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic003G361300--Sobic009G128300 Sobic001G106000--Sobic003G040800 Sobic003G017200 Sobic003G017200 Sobic001G106000--Sobic003G017200 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G106000--Sobic001G430700 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic002G182800 Sobic002G182800 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G040800--Sobic003G017200 Sobic001G509400 Sobic001G509400 Sobic003G040800--Sobic001G509400 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G310600 Sobic004G310600 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G155150 Sobic004G155150 Sobic004G285100--Sobic004G155150 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic002G267800--Sobic001G430700 Sobic002G267800--Sobic001G106000 Sobic002G267800--Sobic003G040800 Sobic002G267800--Sobic001G450800 Sobic001G106200 Sobic001G106200 Sobic002G267800--Sobic001G106200 Sobic002G267800--Sobic003G141800 Sobic001G307200 Sobic001G307200 Sobic002G267800--Sobic001G307200 Sobic002G267800--Sobic004G285100 Sobic002G267800--Sobic003G017200 Sobic006G267900 Sobic006G267900 Sobic003G141800--Sobic006G267900 Sobic010G071700 Sobic010G071700 Sobic003G141800--Sobic010G071700 Sobic002G189000 Sobic002G189000 Sobic003G141800--Sobic002G189000 Sobic004G283300 Sobic004G283300 Sobic003G141800--Sobic004G283300 Sobic003G373150 Sobic003G373150 Sobic003G141800--Sobic003G373150 Sobic003G141800--Sobic003G233900 Sobic003G141800--Sobic001G430700 Sobic003G141800--Sobic004G285100 Sobic006G032200 Sobic006G032200 Sobic003G141800--Sobic006G032200 Sobic009G000700--Sobic004G310600 Sobic003G078501 Sobic003G078501 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic010G006700 Sobic010G006700 Sobic009G000700--Sobic010G006700 Sobic004G331300 Sobic004G331300 Sobic009G000700--Sobic004G331300 Sobic009G000700--Sobic003G233900 Sobic009G000700--Sobic003G373150 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100
Octagon: transcription factors


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