Gene annotation
Transcriptome id Sobic.002G267800.1
Synonym ZPR1, Sb02g030180
Functional annotation expressed protein
UniProt C5X613
Pfam -
Panther DB PTHR33601 PTHR33601:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60890 : protein binding
RAP-DB (Rice) LOC_Os09g34890.1 : expressed protein
MaizeGDB (Corn) Zm00025a014371 , Zm00025a047693
Brachypodium -
Barley -
Wheat TraesCS5A02G308500 , TraesCS5B02G308900
Populus -


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cDNA sequences
Sobic.002G267800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G430700 expressed protein -
2 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
3 Sobic.003G040800 WRKY102, expressed -
4 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
5 Sobic.001G106200 Homeobox domain containing protein, expressed -
6 Sobic.003G141800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed -
7 Sobic.001G307200 exonuclease, putative, expressed -
8 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
9 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
10 Sobic.003G361300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
11 Sobic.003G144200 Homeobox domain containing protein, expressed -
12 Sobic.002G023900 Homeobox domain containing protein, expressed -
13 Sobic.001G145100 RIO1 family protein, expressed K08818: cell division cycle 2-like
14 Sobic.003G233900 - -
15 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
16 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.002G010100 "may play a role as a meristem identity gene, as does AP1 in Arabidopsis"(PubMedID : 9065695)@OsMADS15 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
18 Sobic.009G253950 - -
19 Sobic.003G373150 - -
20 Sobic.010G150200 OsFBX209 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G267800 Sobic002G267800 Sobic001G430700 Sobic001G430700 Sobic002G267800--Sobic001G430700 Sobic001G106000 Sobic001G106000 Sobic002G267800--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic002G267800--Sobic003G040800 Sobic001G450800 Sobic001G450800 Sobic002G267800--Sobic001G450800 Sobic001G106200 Sobic001G106200 Sobic002G267800--Sobic001G106200 Sobic003G141800 Sobic003G141800 Sobic002G267800--Sobic003G141800 Sobic001G307200 Sobic001G307200 Sobic002G267800--Sobic001G307200 Sobic004G285100 Sobic004G285100 Sobic002G267800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic002G267800--Sobic003G017200 Sobic001G430700--Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic001G430700--Sobic003G361300 Sobic001G430700--Sobic001G106000 Sobic001G430700--Sobic003G040800 Sobic001G430700--Sobic004G285100 Sobic003G233900 Sobic003G233900 Sobic001G430700--Sobic003G233900 Sobic001G430700--Sobic002G267800 Sobic001G430700--Sobic003G141800 Sobic009G000700 Sobic009G000700 Sobic001G430700--Sobic009G000700 Sobic001G106000--Sobic003G040800 Sobic001G106000--Sobic003G017200 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic009G128300 Sobic009G128300 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G106000--Sobic001G430700 Sobic003G227600 Sobic003G227600 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic002G182800 Sobic002G182800 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic009G216900 Sobic009G216900 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G040800--Sobic003G017200 Sobic001G509400 Sobic001G509400 Sobic003G040800--Sobic001G509400 Sobic001G450800--Sobic003G361300 Sobic001G450800--Sobic001G430700 Sobic003G198150 Sobic003G198150 Sobic001G450800--Sobic003G198150 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic001G450800--Sobic003G227600 Sobic008G044750 Sobic008G044750 Sobic001G450800--Sobic008G044750 Sobic001G450800--Sobic009G216900 Sobic001G450800--Sobic004G285100 Sobic001G106200--Sobic001G106000 Sobic002G010100 Sobic002G010100 Sobic001G106200--Sobic002G010100 Sobic001G106200--Sobic003G040800 Sobic001G106200--Sobic002G023900 Sobic001G145100 Sobic001G145100 Sobic001G106200--Sobic001G145100 Sobic001G106200--Sobic002G267800 Sobic001G106200--Sobic007G153001 Sobic001G106200--Sobic001G430700 Sobic001G106200--Sobic001G450800 Sobic006G267900 Sobic006G267900 Sobic003G141800--Sobic006G267900 Sobic010G071700 Sobic010G071700 Sobic003G141800--Sobic010G071700 Sobic002G189000 Sobic002G189000 Sobic003G141800--Sobic002G189000 Sobic004G283300 Sobic004G283300 Sobic003G141800--Sobic004G283300 Sobic003G373150 Sobic003G373150 Sobic003G141800--Sobic003G373150 Sobic003G141800--Sobic003G233900 Sobic003G141800--Sobic001G430700 Sobic003G141800--Sobic004G285100 Sobic006G032200 Sobic006G032200 Sobic003G141800--Sobic006G032200 Sobic001G307200--Sobic001G430700 Sobic001G307200--Sobic001G106000 Sobic001G307200--Sobic001G450800 Sobic001G307200--Sobic003G040800 Sobic004G257350 Sobic004G257350 Sobic001G307200--Sobic004G257350 Sobic010G260300 Sobic010G260300 Sobic001G307200--Sobic010G260300 Sobic001G307200--Sobic002G267800 Sobic001G307200--Sobic004G285100 Sobic001G307200--Sobic003G233900 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G310600 Sobic004G310600 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G155150 Sobic004G155150 Sobic004G285100--Sobic004G155150 Sobic003G017200--Sobic001G106000 Sobic003G017200--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G017200--Sobic002G342100 Sobic003G017200--Sobic007G153001 Sobic006G200200 Sobic006G200200 Sobic003G017200--Sobic006G200200 Sobic003G017200--Sobic009G128300 Sobic003G144200 Sobic003G144200 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic003G017200--Sobic002G182800
Octagon: transcription factors


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