Gene annotation
Transcriptome id Sobic.010G150200.1
Synonym
Functional annotation OsFBX209 - F-box domain containing protein, expressed
UniProt A0A194YKF1
Pfam -
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02890.1 : OsFBX209 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6A02G341000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.004G234300 DUF581 domain containing protein, expressed -
3 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
4 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
5 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.009G156600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
7 Sobic.002G267800 expressed protein -
8 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
9 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G060766 - -
11 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
12 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
13 Sobic.001G430700 expressed protein -
14 Sobic.003G373150 - -
15 Sobic.009G201500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
16 Sobic.003G040800 WRKY102, expressed -
17 Sobic.003G144200 Homeobox domain containing protein, expressed -
18 Sobic.008G119400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
19 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.010G101400 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G150200 Sobic010G150200 Sobic001G286000 Sobic001G286000 Sobic010G150200--Sobic001G286000 Sobic004G234300 Sobic004G234300 Sobic010G150200--Sobic004G234300 Sobic001G106000 Sobic001G106000 Sobic010G150200--Sobic001G106000 Sobic010G033300 Sobic010G033300 Sobic010G150200--Sobic010G033300 Sobic001G450800 Sobic001G450800 Sobic010G150200--Sobic001G450800 Sobic009G156600 Sobic009G156600 Sobic010G150200--Sobic009G156600 Sobic002G267800 Sobic002G267800 Sobic010G150200--Sobic002G267800 Sobic004G285100 Sobic004G285100 Sobic010G150200--Sobic004G285100 Sobic004G261200 Sobic004G261200 Sobic010G150200--Sobic004G261200 Sobic009G000700 Sobic009G000700 Sobic001G286000--Sobic009G000700 Sobic004G310600 Sobic004G310600 Sobic001G286000--Sobic004G310600 Sobic004G155150 Sobic004G155150 Sobic001G286000--Sobic004G155150 Sobic007G051600 Sobic007G051600 Sobic001G286000--Sobic007G051600 Sobic009G201500 Sobic009G201500 Sobic001G286000--Sobic009G201500 Sobic006G267900 Sobic006G267900 Sobic001G286000--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic001G286000--Sobic001G125100 Sobic003G078501 Sobic003G078501 Sobic001G286000--Sobic003G078501 Sobic010G220400 Sobic010G220400 Sobic001G286000--Sobic010G220400 Sobic003G223900 Sobic003G223900 Sobic004G234300--Sobic003G223900 Sobic010G222900 Sobic010G222900 Sobic004G234300--Sobic010G222900 Sobic004G234300--Sobic010G150200 Sobic004G040800 Sobic004G040800 Sobic004G234300--Sobic004G040800 Sobic001G493500 Sobic001G493500 Sobic004G234300--Sobic001G493500 Sobic002G239900 Sobic002G239900 Sobic004G234300--Sobic002G239900 Sobic010G011900 Sobic010G011900 Sobic004G234300--Sobic010G011900 Sobic004G234300--Sobic009G201500 Sobic010G077300 Sobic010G077300 Sobic004G234300--Sobic010G077300 Sobic003G040800 Sobic003G040800 Sobic001G106000--Sobic003G040800 Sobic003G017200 Sobic003G017200 Sobic001G106000--Sobic003G017200 Sobic003G233900 Sobic003G233900 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic009G128300 Sobic009G128300 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G430700 Sobic001G430700 Sobic001G106000--Sobic001G430700 Sobic003G227600 Sobic003G227600 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001 Sobic009G082600 Sobic009G082600 Sobic010G033300--Sobic009G082600 Sobic010G033300--Sobic010G150200 Sobic007G211300 Sobic007G211300 Sobic010G033300--Sobic007G211300 Sobic010G033300--Sobic003G223900 Sobic002G257900 Sobic002G257900 Sobic010G033300--Sobic002G257900 Sobic001G119700 Sobic001G119700 Sobic010G033300--Sobic001G119700 Sobic010G033300--Sobic004G234300 Sobic003G410700 Sobic003G410700 Sobic010G033300--Sobic003G410700 Sobic010G033300--Sobic002G267800 Sobic003G361300 Sobic003G361300 Sobic001G450800--Sobic003G361300 Sobic001G450800--Sobic001G430700 Sobic003G198150 Sobic003G198150 Sobic001G450800--Sobic003G198150 Sobic001G450800--Sobic001G106000 Sobic001G450800--Sobic003G040800 Sobic001G450800--Sobic003G227600 Sobic008G044750 Sobic008G044750 Sobic001G450800--Sobic008G044750 Sobic009G216900 Sobic009G216900 Sobic001G450800--Sobic009G216900 Sobic001G450800--Sobic004G285100 Sobic009G156600--Sobic009G000700 Sobic009G156600--Sobic004G155150 Sobic009G156600--Sobic004G310600 Sobic004G245900 Sobic004G245900 Sobic009G156600--Sobic004G245900 Sobic007G089533 Sobic007G089533 Sobic009G156600--Sobic007G089533 Sobic009G000801 Sobic009G000801 Sobic009G156600--Sobic009G000801 Sobic009G156600--Sobic003G078501 Sobic009G156600--Sobic009G216900 Sobic009G156600--Sobic003G227600 Sobic002G267800--Sobic001G430700 Sobic002G267800--Sobic001G106000 Sobic002G267800--Sobic003G040800 Sobic002G267800--Sobic001G450800 Sobic001G106200 Sobic001G106200 Sobic002G267800--Sobic001G106200 Sobic003G141800 Sobic003G141800 Sobic002G267800--Sobic003G141800 Sobic001G307200 Sobic001G307200 Sobic002G267800--Sobic001G307200 Sobic002G267800--Sobic004G285100 Sobic002G267800--Sobic003G017200 Sobic004G285100--Sobic003G233900 Sobic004G285100--Sobic003G040800 Sobic004G285100--Sobic004G310600 Sobic004G285100--Sobic009G000700 Sobic004G285100--Sobic001G106000 Sobic005G087800 Sobic005G087800 Sobic004G285100--Sobic005G087800 Sobic004G285100--Sobic009G128300 Sobic004G285100--Sobic003G227600 Sobic004G285100--Sobic004G155150 Sobic003G144600 Sobic003G144600 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic009G194200 Sobic009G194200 Sobic004G261200--Sobic009G194200 Sobic004G261200--Sobic003G410700 Sobic007G180900 Sobic007G180900 Sobic004G261200--Sobic007G180900 Sobic003G293600 Sobic003G293600 Sobic004G261200--Sobic003G293600 Sobic001G063600 Sobic001G063600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic007G166900 Sobic007G166900 Sobic004G261200--Sobic007G166900
Octagon: transcription factors


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