Gene annotation
Transcriptome id Sobic.009G156600.1
Synonym influx carriers auxin resistant 1/like aux1, Sb09g021990, SbLAX5, LAX1
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920)
transmembrane amino acid transporter protein, putative, expressed
UniProt C5YYU5
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF256
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K13946; AUX1, auxin influx carrier (AUX1 LAX family)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01240 : like AUXIN RESISTANT 1
RAP-DB (Rice) LOC_Os05g37470.3 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a043787 , Zm00025a003791 , Zm00025a026807 , Zm00025a033966 , Zm00025a001545
Brachypodium KQK10644 , KQK10645 , KQJ96114 , KQK22608
Barley HORVU4Hr1G063650.4 , HORVU4Hr1G063650.6 , HORVU4Hr1G063650.1 , HORVU4Hr1G063650.2 , HORVU4Hr1G063650.3 , HORVU1Hr1G073490.6 , HORVU1Hr1G073490.7 , HORVU1Hr1G073490.4 , HORVU1Hr1G073490.5 , HORVU1Hr1G073490.2 , HORVU1Hr1G073490.1 , HORVU1Hr1G073490.8 , HORVU1Hr1G073490.9 , HORVU4Hr1G019930.1 , HORVU4Hr1G019930.2 , HORVU4Hr1G019930.3 , HORVU4Hr1G019930.4 , HORVU4Hr1G019930.5 , HORVU6Hr1G031510.1 , HORVU3Hr1G084750.1 , HORVU3Hr1G084750.3 , HORVU3Hr1G084750.2 , HORVU3Hr1G084750.5 , HORVU3Hr1G084750.4 , HORVU3Hr1G084750.7 , HORVU3Hr1G084750.6 , HORVU1Hr1G016700.3 , HORVU1Hr1G016700.1 , HORVU4Hr1G063650.5 , HORVU4Hr1G063650.7 , HORVU4Hr1G063650.8
Wheat TraesCS1D02G277600 , TraesCS3B02G401000 , TraesCS3D02G362100 , TraesCS4D02G108800 , TraesCS4B02G226500 , TraesCS1B02G095900 , TraesCS4A02G207600 , TraesCS1A02G278400 , TraesCS3A02G369200 , TraesCS1A02G077800 , TraesCS4B02G111100 , TraesCS1D02G079900 , TraesCS4D02G227200 , TraesCS4A02G070500 , TraesCS1B02G287300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
2 Sobic.004G155150 - -
3 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
4 Sobic.004G245900 - -
5 Sobic.007G089533 - -
6 Sobic.009G000801 - -
7 Sobic.003G078501 - -
8 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
10 Sobic.004G331300 AP2 domain containing protein, expressed -
11 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
12 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
14 Sobic.001G379000 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
15 Sobic.003G233900 - -
16 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -
17 Sobic.003G373150 - -
18 Sobic.006G267900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.003G367350 - -
20 Sobic.004G257350 - -


Gene co-expression network
sample Sobic009G156600 Sobic009G156600 Sobic009G000700 Sobic009G000700 Sobic009G156600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic009G156600--Sobic004G155150 Sobic004G310600 Sobic004G310600 Sobic009G156600--Sobic004G310600 Sobic004G245900 Sobic004G245900 Sobic009G156600--Sobic004G245900 Sobic007G089533 Sobic007G089533 Sobic009G156600--Sobic007G089533 Sobic009G000801 Sobic009G000801 Sobic009G156600--Sobic009G000801 Sobic003G078501 Sobic003G078501 Sobic009G156600--Sobic003G078501 Sobic009G216900 Sobic009G216900 Sobic009G156600--Sobic009G216900 Sobic003G227600 Sobic003G227600 Sobic009G156600--Sobic003G227600 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic010G006700 Sobic010G006700 Sobic009G000700--Sobic010G006700 Sobic004G331300 Sobic004G331300 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G257350 Sobic004G257350 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic004G245900--Sobic004G310600 Sobic004G245900--Sobic003G373150 Sobic004G245900--Sobic009G000700 Sobic003G198150 Sobic003G198150 Sobic004G245900--Sobic003G198150 Sobic004G283201 Sobic004G283201 Sobic004G245900--Sobic004G283201 Sobic004G245900--Sobic003G233900 Sobic006G055600 Sobic006G055600 Sobic004G245900--Sobic006G055600 Sobic003G361300 Sobic003G361300 Sobic004G245900--Sobic003G361300 Sobic004G321000 Sobic004G321000 Sobic004G245900--Sobic004G321000 Sobic007G089533--Sobic004G331300 Sobic007G089533--Sobic009G000700 Sobic007G051600 Sobic007G051600 Sobic007G089533--Sobic007G051600 Sobic007G089533--Sobic004G310600 Sobic003G015100 Sobic003G015100 Sobic007G089533--Sobic003G015100 Sobic007G089533--Sobic004G155150 Sobic009G253950 Sobic009G253950 Sobic007G089533--Sobic009G253950 Sobic007G089533--Sobic010G006700 Sobic001G159850 Sobic001G159850 Sobic007G089533--Sobic001G159850 Sobic009G000801--Sobic004G155150 Sobic009G000801--Sobic004G257350 Sobic009G000801--Sobic009G156600 Sobic009G000801--Sobic009G000700 Sobic001G507500 Sobic001G507500 Sobic009G000801--Sobic001G507500 Sobic001G286000 Sobic001G286000 Sobic009G000801--Sobic001G286000 Sobic002G027500 Sobic002G027500 Sobic009G000801--Sobic002G027500 Sobic002G229600 Sobic002G229600 Sobic009G000801--Sobic002G229600 Sobic009G000801--Sobic004G310600 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic009G216900--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic009G216900--Sobic003G040800 Sobic002G182800 Sobic002G182800 Sobic009G216900--Sobic002G182800 Sobic002G342100 Sobic002G342100 Sobic009G216900--Sobic002G342100 Sobic001G509400 Sobic001G509400 Sobic009G216900--Sobic001G509400 Sobic004G285100 Sobic004G285100 Sobic009G216900--Sobic004G285100 Sobic003G079800 Sobic003G079800 Sobic009G216900--Sobic003G079800 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic001G075101 Sobic001G075101 Sobic003G227600--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G227600--Sobic002G331450
Octagon: transcription factors


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