Gene annotation
Transcriptome id Sobic.007G089533.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8R6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331300 AP2 domain containing protein, expressed -
2 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
3 Sobic.007G051600 - -
4 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
5 Sobic.003G015100 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.004G155150 - -
7 Sobic.009G253950 - -
8 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic007G089533 Sobic007G089533 Sobic004G331300 Sobic004G331300 Sobic007G089533--Sobic004G331300 Sobic009G000700 Sobic009G000700 Sobic007G089533--Sobic009G000700 Sobic007G051600 Sobic007G051600 Sobic007G089533--Sobic007G051600 Sobic004G310600 Sobic004G310600 Sobic007G089533--Sobic004G310600 Sobic003G015100 Sobic003G015100 Sobic007G089533--Sobic003G015100 Sobic004G155150 Sobic004G155150 Sobic007G089533--Sobic004G155150 Sobic009G253950 Sobic009G253950 Sobic007G089533--Sobic009G253950 Sobic010G006700 Sobic010G006700 Sobic007G089533--Sobic010G006700 Sobic001G159850 Sobic001G159850 Sobic007G089533--Sobic001G159850 Sobic004G331300--Sobic001G159850 Sobic009G000700--Sobic004G310600 Sobic003G078501 Sobic003G078501 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic003G373150 Sobic003G373150 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic001G125100 Sobic001G125100 Sobic009G000700--Sobic001G125100 Sobic007G051600--Sobic004G331300 Sobic007G051600--Sobic009G000700 Sobic007G051600--Sobic004G310600 Sobic007G051600--Sobic001G159850 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G310600--Sobic004G155150 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900 Sobic001G184500 Sobic001G184500 Sobic003G015100--Sobic001G184500 Sobic003G015100--Sobic007G089533 Sobic002G079801 Sobic002G079801 Sobic003G015100--Sobic002G079801 Sobic008G044750 Sobic008G044750 Sobic003G015100--Sobic008G044750 Sobic010G101700 Sobic010G101700 Sobic003G015100--Sobic010G101700 Sobic007G005000 Sobic007G005000 Sobic003G015100--Sobic007G005000 Sobic003G429500 Sobic003G429500 Sobic003G015100--Sobic003G429500 Sobic003G198150 Sobic003G198150 Sobic003G015100--Sobic003G198150 Sobic003G361300 Sobic003G361300 Sobic003G015100--Sobic003G361300 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100 Sobic009G253950--Sobic003G233900 Sobic003G040800 Sobic003G040800 Sobic009G253950--Sobic003G040800 Sobic003G079800 Sobic003G079800 Sobic009G253950--Sobic003G079800 Sobic009G216900 Sobic009G216900 Sobic009G253950--Sobic009G216900 Sobic009G128300 Sobic009G128300 Sobic009G253950--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic009G253950--Sobic002G182800 Sobic009G253950--Sobic009G000700 Sobic004G285100 Sobic004G285100 Sobic009G253950--Sobic004G285100 Sobic009G253950--Sobic008G044750 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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