Gene annotation
Transcriptome id Sobic.008G119400.1
Synonym RALFL33, Sb08g017280
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5YPF1
Pfam PF05498
Panther DB PTHR33136 PTHR33136:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02900 : rapid alkalinization factor 1
RAP-DB (Rice) LOC_Os12g35670.1 : RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) Zm00025a054344 , Zm00025a025531
Brachypodium KQJ86440 , PNT73526
Barley HORVU5Hr1G024410.1 , HORVU1Hr1G080640.1 , HORVU1Hr1G080640.2
Wheat -
Populus -


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cDNA sequences
Sobic.008G119400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G101400 glycosyl transferase 8 domain containing protein, putative, expressed -
2 Sobic.001G197400 actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
4 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
5 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
6 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
7 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
8 Sobic.002G124700 up-regulated by silicon application(PubMedID : 24879770)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
9 Sobic.010G201388 - -
10 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
11 Sobic.003G281800 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
13 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
14 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G144200 Homeobox domain containing protein, expressed -
16 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
17 Sobic.004G257300 GPI-anchored protein, putative, expressed -
18 Sobic.009G184400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.001G476400 - -
20 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G119400 Sobic008G119400 Sobic010G101400 Sobic010G101400 Sobic008G119400--Sobic010G101400 Sobic001G197400 Sobic001G197400 Sobic008G119400--Sobic001G197400 Sobic001G217000 Sobic001G217000 Sobic008G119400--Sobic001G217000 Sobic010G008600 Sobic010G008600 Sobic008G119400--Sobic010G008600 Sobic009G182200 Sobic009G182200 Sobic008G119400--Sobic009G182200 Sobic001G157400 Sobic001G157400 Sobic008G119400--Sobic001G157400 Sobic001G050800 Sobic001G050800 Sobic008G119400--Sobic001G050800 Sobic002G124700 Sobic002G124700 Sobic008G119400--Sobic002G124700 Sobic010G201388 Sobic010G201388 Sobic008G119400--Sobic010G201388 Sobic010G101400--Sobic010G008600 Sobic010G101400--Sobic008G119400 Sobic007G216500 Sobic007G216500 Sobic010G101400--Sobic007G216500 Sobic010G030900 Sobic010G030900 Sobic010G101400--Sobic010G030900 Sobic003G127100 Sobic003G127100 Sobic010G101400--Sobic003G127100 Sobic002G113500 Sobic002G113500 Sobic010G101400--Sobic002G113500 Sobic009G194200 Sobic009G194200 Sobic010G101400--Sobic009G194200 Sobic004G257300 Sobic004G257300 Sobic010G101400--Sobic004G257300 Sobic001G321800 Sobic001G321800 Sobic010G101400--Sobic001G321800 Sobic010G105800 Sobic010G105800 Sobic001G197400--Sobic010G105800 Sobic009G255500 Sobic009G255500 Sobic001G197400--Sobic009G255500 Sobic001G197400--Sobic010G030900 Sobic001G101500 Sobic001G101500 Sobic001G197400--Sobic001G101500 Sobic009G208800 Sobic009G208800 Sobic001G197400--Sobic009G208800 Sobic009G220200 Sobic009G220200 Sobic001G197400--Sobic009G220200 Sobic002G248100 Sobic002G248100 Sobic001G197400--Sobic002G248100 Sobic001G052300 Sobic001G052300 Sobic001G197400--Sobic001G052300 Sobic006G161400 Sobic006G161400 Sobic001G197400--Sobic006G161400 Sobic001G473900 Sobic001G473900 Sobic001G217000--Sobic001G473900 Sobic001G113700 Sobic001G113700 Sobic001G217000--Sobic001G113700 Sobic002G379400 Sobic002G379400 Sobic001G217000--Sobic002G379400 Sobic010G076600 Sobic010G076600 Sobic001G217000--Sobic010G076600 Sobic003G338900 Sobic003G338900 Sobic001G217000--Sobic003G338900 Sobic002G210300 Sobic002G210300 Sobic001G217000--Sobic002G210300 Sobic001G217000--Sobic009G208800 Sobic001G217000--Sobic004G257300 Sobic001G217000--Sobic009G220200 Sobic010G008600--Sobic003G127100 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G008600--Sobic010G030900 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic001G061900 Sobic001G061900 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic002G372800 Sobic002G372800 Sobic010G008600--Sobic002G372800 Sobic003G319000 Sobic003G319000 Sobic009G182200--Sobic003G319000 Sobic009G171100 Sobic009G171100 Sobic009G182200--Sobic009G171100 Sobic003G217100 Sobic003G217100 Sobic009G182200--Sobic003G217100 Sobic003G348200 Sobic003G348200 Sobic009G182200--Sobic003G348200 Sobic009G182200--Sobic010G201388 Sobic001G441000 Sobic001G441000 Sobic009G182200--Sobic001G441000 Sobic004G123000 Sobic004G123000 Sobic009G182200--Sobic004G123000 Sobic003G224300 Sobic003G224300 Sobic009G182200--Sobic003G224300 Sobic006G013000 Sobic006G013000 Sobic009G182200--Sobic006G013000 Sobic001G157400--Sobic001G050800 Sobic002G023900 Sobic002G023900 Sobic001G157400--Sobic002G023900 Sobic006G026400 Sobic006G026400 Sobic001G157400--Sobic006G026400 Sobic002G068800 Sobic002G068800 Sobic001G157400--Sobic002G068800 Sobic003G278700 Sobic003G278700 Sobic001G157400--Sobic003G278700 Sobic003G227600 Sobic003G227600 Sobic001G157400--Sobic003G227600 Sobic006G032200 Sobic006G032200 Sobic001G157400--Sobic006G032200 Sobic006G078300 Sobic006G078300 Sobic001G157400--Sobic006G078300 Sobic009G170100 Sobic009G170100 Sobic001G157400--Sobic009G170100 Sobic001G050800--Sobic001G157400 Sobic001G050800--Sobic009G170100 Sobic006G194600 Sobic006G194600 Sobic001G050800--Sobic006G194600 Sobic001G050800--Sobic006G026400 Sobic001G050800--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic001G050800--Sobic004G281200 Sobic004G244300 Sobic004G244300 Sobic001G050800--Sobic004G244300 Sobic004G244100 Sobic004G244100 Sobic001G050800--Sobic004G244100 Sobic001G050800--Sobic002G068800 Sobic002G124700--Sobic004G257300 Sobic006G176700 Sobic006G176700 Sobic002G124700--Sobic006G176700 Sobic003G305601 Sobic003G305601 Sobic002G124700--Sobic003G305601 Sobic002G270000 Sobic002G270000 Sobic002G124700--Sobic002G270000 Sobic002G124700--Sobic001G217000 Sobic004G288700 Sobic004G288700 Sobic002G124700--Sobic004G288700 Sobic009G195900 Sobic009G195900 Sobic002G124700--Sobic009G195900 Sobic001G084100 Sobic001G084100 Sobic002G124700--Sobic001G084100 Sobic003G108200 Sobic003G108200 Sobic002G124700--Sobic003G108200 Sobic010G201388--Sobic009G182200 Sobic010G201388--Sobic004G123000 Sobic001G173300 Sobic001G173300 Sobic010G201388--Sobic001G173300 Sobic003G253500 Sobic003G253500 Sobic010G201388--Sobic003G253500 Sobic004G259600 Sobic004G259600 Sobic010G201388--Sobic004G259600 Sobic003G227200 Sobic003G227200 Sobic010G201388--Sobic003G227200 Sobic004G247200 Sobic004G247200 Sobic010G201388--Sobic004G247200 Sobic001G284400 Sobic001G284400 Sobic010G201388--Sobic001G284400 Sobic010G201388--Sobic002G113500
Octagon: transcription factors


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