Gene annotation
| Transcriptome id | Sobic.001G217000.1 |
|---|---|
| Synonym | Sb01g019100 |
| Functional annotation | DUF584 domain containing protein, putative, expressed |
| UniProt | C5WYD2 |
| Pfam | PF04520 |
| Panther DB | PTHR33083 PTHR33083:SF9 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G03230 : Protein of unknown function, DUF584 |
|---|---|
| RAP-DB (Rice) | LOC_Os10g33990.1 : DUF584 domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a056629 , Zm00025a021084 , Zm00025a053920 , Zm00025a017604 |
| Brachypodium | PNT69104 , KQK24026 , KQJ97135 , PNT65423 , PNT65422 |
| Barley | HORVU1Hr1G041890.1 |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.001G217000 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G473900 | Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed | K09286: EREBP-like factor |
| 2 | Sobic.001G113700 | cytochrome b561, putative, expressed | K08360: cytochrome b-561 |
| 3 | Sobic.002G379400 | CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K14498: serine/threonine-protein kinase SRK2 |
| 4 | Sobic.010G076600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed | - |
| 5 | Sobic.003G338900 | expressed protein | - |
| 6 | Sobic.002G210300 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hypro1, putative, expressed | - |
| 7 | Sobic.009G208800 | hydrolase, acting on carbon-nitrogen, putative, expressed | - |
| 8 | Sobic.004G257300 | GPI-anchored protein, putative, expressed | - |
| 9 | Sobic.009G220200 | exostosin family domain containing protein, expressed | - |
| 10 | Sobic.001G051800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed | - |
| 11 | Sobic.001G209800 | harpin-induced protein 1 domain containing protein, expressed | - |
| 12 | Sobic.002G353400 | transporter-related, putative, expressed | K15285: solute carrier family 35, member E3 |
| 13 | Sobic.003G111500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed | K13789: geranylgeranyl diphosphate synthase, type II |
| 14 | Sobic.009G071800 | 6-phosphofructokinase, putative, expressed | K00850: pfkA, 6-phosphofructokinase 1 |
| 15 | Sobic.004G259500 | expressed protein | - |
| 16 | Sobic.001G513700 | down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed | - |
| 17 | Sobic.004G268700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | K09843: (+)-abscisic acid 8'-hydroxylase |
| 18 | Sobic.001G476400 | - | - |
| 19 | Sobic.003G296700 | protein kinase domain containing protein, expressed | - |
| 20 | Sobic.003G373000 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
Gene co-expression network
Octagon: transcription factors
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