Gene annotation
Transcriptome id Sobic.002G210300.1
Synonym Sb02g025420
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
hypro1, putative, expressed
UniProt A0A1W0W580
Pfam PF01762
Panther DB PTHR11214 PTHR11214:SF132
NCBI CDD KOG2288; Galactosyltransferases
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008378galactosyltransferase activity GO:0006486protein glycosylation


Orthologs (automatic annotation)
TAIR AT5G57500 : Galactosyltransferase family protein
RAP-DB (Rice) LOC_Os09g26300.1 : hypro1, putative, expressed
MaizeGDB (Corn) Zm00025a013951 , Zm00025a022382 , Zm00025a047106 , Zm00025a044477
Brachypodium KQK04711 , KQK04710 , KQK05014 , KQJ90345 , KQJ86276 , PNT64651
Barley HORVU0Hr1G013020.2 , HORVU5Hr1G059100.1 , HORVU5Hr1G059090.1 , HORVU5Hr1G063330.2 , HORVU5Hr1G063330.3 , HORVU5Hr1G063330.1 , HORVU0Hr1G013020.1 , HORVU1Hr1G083700.1 , HORVU0Hr1G013010.1 , HORVU0Hr1G013010.3 , HORVU0Hr1G013010.2 , HORVU0Hr1G013010.4
Wheat -
Populus -


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cDNA sequences
Sobic.002G210300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.003G338900 expressed protein -
3 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
4 Sobic.003G012800 AP2 domain containing protein, expressed -
5 Sobic.009G220200 exostosin family domain containing protein, expressed -
6 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
7 Sobic.003G339100 DUF623 domain containing protein, expressed -
8 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
10 Sobic.004G257300 GPI-anchored protein, putative, expressed -
11 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
13 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.003G111500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
15 Sobic.002G353400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
16 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
17 Sobic.007G124301 - -
18 Sobic.006G216300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.003G373000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G210300 Sobic002G210300 Sobic009G027900 Sobic009G027900 Sobic002G210300--Sobic009G027900 Sobic003G338900 Sobic003G338900 Sobic002G210300--Sobic003G338900 Sobic001G217000 Sobic001G217000 Sobic002G210300--Sobic001G217000 Sobic003G012800 Sobic003G012800 Sobic002G210300--Sobic003G012800 Sobic009G220200 Sobic009G220200 Sobic002G210300--Sobic009G220200 Sobic001G051800 Sobic001G051800 Sobic002G210300--Sobic001G051800 Sobic003G339100 Sobic003G339100 Sobic002G210300--Sobic003G339100 Sobic002G272900 Sobic002G272900 Sobic002G210300--Sobic002G272900 Sobic001G113700 Sobic001G113700 Sobic002G210300--Sobic001G113700 Sobic009G248500 Sobic009G248500 Sobic009G027900--Sobic009G248500 Sobic001G322200 Sobic001G322200 Sobic009G027900--Sobic001G322200 Sobic006G066200 Sobic006G066200 Sobic009G027900--Sobic006G066200 Sobic008G042900 Sobic008G042900 Sobic009G027900--Sobic008G042900 Sobic002G140300 Sobic002G140300 Sobic009G027900--Sobic002G140300 Sobic001G532200 Sobic001G532200 Sobic009G027900--Sobic001G532200 Sobic001G464900 Sobic001G464900 Sobic009G027900--Sobic001G464900 Sobic006G165100 Sobic006G165100 Sobic009G027900--Sobic006G165100 Sobic001G516600 Sobic001G516600 Sobic009G027900--Sobic001G516600 Sobic001G189700 Sobic001G189700 Sobic003G338900--Sobic001G189700 Sobic010G076600 Sobic010G076600 Sobic003G338900--Sobic010G076600 Sobic009G217600 Sobic009G217600 Sobic003G338900--Sobic009G217600 Sobic002G379400 Sobic002G379400 Sobic003G338900--Sobic002G379400 Sobic001G476400 Sobic001G476400 Sobic003G338900--Sobic001G476400 Sobic001G341600 Sobic001G341600 Sobic003G338900--Sobic001G341600 Sobic001G290400 Sobic001G290400 Sobic003G338900--Sobic001G290400 Sobic003G296700 Sobic003G296700 Sobic003G338900--Sobic003G296700 Sobic001G473900 Sobic001G473900 Sobic003G338900--Sobic001G473900 Sobic001G217000--Sobic001G473900 Sobic001G217000--Sobic001G113700 Sobic001G217000--Sobic002G379400 Sobic001G217000--Sobic010G076600 Sobic001G217000--Sobic003G338900 Sobic001G217000--Sobic002G210300 Sobic009G208800 Sobic009G208800 Sobic001G217000--Sobic009G208800 Sobic004G257300 Sobic004G257300 Sobic001G217000--Sobic004G257300 Sobic001G217000--Sobic009G220200 Sobic010G200700 Sobic010G200700 Sobic003G012800--Sobic010G200700 Sobic003G268700 Sobic003G268700 Sobic003G012800--Sobic003G268700 Sobic003G373000 Sobic003G373000 Sobic003G012800--Sobic003G373000 Sobic006G089300 Sobic006G089300 Sobic003G012800--Sobic006G089300 Sobic006G228300 Sobic006G228300 Sobic003G012800--Sobic006G228300 Sobic001G209800 Sobic001G209800 Sobic003G012800--Sobic001G209800 Sobic001G077400 Sobic001G077400 Sobic003G012800--Sobic001G077400 Sobic003G012800--Sobic009G217600 Sobic002G036100 Sobic002G036100 Sobic003G012800--Sobic002G036100 Sobic009G220200--Sobic009G208800 Sobic009G220200--Sobic003G296700 Sobic009G220200--Sobic001G051800 Sobic009G220200--Sobic001G516600 Sobic001G173300 Sobic001G173300 Sobic009G220200--Sobic001G173300 Sobic009G220200--Sobic004G257300 Sobic002G374100 Sobic002G374100 Sobic009G220200--Sobic002G374100 Sobic002G362900 Sobic002G362900 Sobic009G220200--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic009G220200--Sobic007G188100 Sobic001G051800--Sobic009G220200 Sobic001G051800--Sobic001G290400 Sobic001G051800--Sobic003G338900 Sobic009G071800 Sobic009G071800 Sobic001G051800--Sobic009G071800 Sobic002G203000 Sobic002G203000 Sobic001G051800--Sobic002G203000 Sobic001G051800--Sobic003G296700 Sobic001G051800--Sobic009G208800 Sobic002G294700 Sobic002G294700 Sobic001G051800--Sobic002G294700 Sobic001G051800--Sobic001G473900 Sobic004G319700 Sobic004G319700 Sobic003G339100--Sobic004G319700 Sobic004G280900 Sobic004G280900 Sobic003G339100--Sobic004G280900 Sobic003G339100--Sobic002G210300 Sobic006G194100 Sobic006G194100 Sobic003G339100--Sobic006G194100 Sobic002G278500 Sobic002G278500 Sobic003G339100--Sobic002G278500 Sobic001G205350 Sobic001G205350 Sobic003G339100--Sobic001G205350 Sobic003G339100--Sobic008G042900 Sobic001G441100 Sobic001G441100 Sobic003G339100--Sobic001G441100 Sobic007G126300 Sobic007G126300 Sobic003G339100--Sobic007G126300 Sobic007G124301 Sobic007G124301 Sobic002G272900--Sobic007G124301 Sobic002G272900--Sobic001G516600 Sobic001G483400 Sobic001G483400 Sobic002G272900--Sobic001G483400 Sobic001G389000 Sobic001G389000 Sobic002G272900--Sobic001G389000 Sobic010G213400 Sobic010G213400 Sobic002G272900--Sobic010G213400 Sobic003G037800 Sobic003G037800 Sobic002G272900--Sobic003G037800 Sobic009G033700 Sobic009G033700 Sobic002G272900--Sobic009G033700 Sobic007G151100 Sobic007G151100 Sobic002G272900--Sobic007G151100 Sobic003G249800 Sobic003G249800 Sobic002G272900--Sobic003G249800 Sobic001G113700--Sobic009G220200 Sobic001G113700--Sobic001G217000 Sobic001G113700--Sobic001G051800 Sobic001G113700--Sobic002G210300 Sobic001G113700--Sobic003G338900 Sobic001G113700--Sobic009G208800 Sobic005G231700 Sobic005G231700 Sobic001G113700--Sobic005G231700 Sobic001G113700--Sobic002G379400 Sobic001G113700--Sobic003G296700
Octagon: transcription factors


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