Gene annotation
Transcriptome id Sobic.006G216300.1
Synonym ATGSTF13, Sb06g028630
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5YG26
Pfam PF00043 PF02798
Panther DB PTHR11260 PTHR11260:SF190
NCBI CDD KOG0867; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G62760 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os01g27360.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK04354
Barley HORVU1Hr1G017050.4 , HORVU1Hr1G017050.5 , HORVU1Hr1G017050.1 , HORVU1Hr1G017050.2 , HORVU1Hr1G017050.3 , HORVU7Hr1G039140.1 , HORVU7Hr1G039140.2 , HORVU7Hr1G039140.3 , HORVU7Hr1G039140.4
Wheat TraesCS5D02G268900 , TraesCS2D02G579500 , TraesCS2A02G045400 , TraesCS2A02G045400 , TraesCS6D02G016700 , TraesCS1B02G097400 , TraesCS1A02G078900 , TraesCS7D02G192500 , TraesCS1B02G097200 , TraesCS5B02G259700 , TraesCS1A02G078800 , TraesCS1D02G081200 , TraesCS2D02G503200 , TraesCS2D02G503200 , TraesCS2D02G044100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G210300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hypro1, putative, expressed -
2 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
3 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
5 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
6 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
7 Sobic.003G338900 expressed protein -
8 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
9 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
10 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
11 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
12 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
13 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
14 Sobic.010G225100 DUF640 domain containing protein, putative, expressed -
15 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.002G278500 nodulin, putative, expressed -
17 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
18 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.006G131400 expressed protein -
20 Sobic.007G124301 - -


Gene co-expression network
sample Sobic006G216300 Sobic006G216300 Sobic002G210300 Sobic002G210300 Sobic006G216300--Sobic002G210300 Sobic002G379400 Sobic002G379400 Sobic006G216300--Sobic002G379400 Sobic003G108200 Sobic003G108200 Sobic006G216300--Sobic003G108200 Sobic002G294700 Sobic002G294700 Sobic006G216300--Sobic002G294700 Sobic002G272900 Sobic002G272900 Sobic006G216300--Sobic002G272900 Sobic001G051800 Sobic001G051800 Sobic006G216300--Sobic001G051800 Sobic003G338900 Sobic003G338900 Sobic006G216300--Sobic003G338900 Sobic001G483400 Sobic001G483400 Sobic006G216300--Sobic001G483400 Sobic004G036600 Sobic004G036600 Sobic006G216300--Sobic004G036600 Sobic009G027900 Sobic009G027900 Sobic002G210300--Sobic009G027900 Sobic002G210300--Sobic003G338900 Sobic001G217000 Sobic001G217000 Sobic002G210300--Sobic001G217000 Sobic003G012800 Sobic003G012800 Sobic002G210300--Sobic003G012800 Sobic009G220200 Sobic009G220200 Sobic002G210300--Sobic009G220200 Sobic002G210300--Sobic001G051800 Sobic003G339100 Sobic003G339100 Sobic002G210300--Sobic003G339100 Sobic002G210300--Sobic002G272900 Sobic001G113700 Sobic001G113700 Sobic002G210300--Sobic001G113700 Sobic004G025000 Sobic004G025000 Sobic002G379400--Sobic004G025000 Sobic002G330300 Sobic002G330300 Sobic002G379400--Sobic002G330300 Sobic002G379400--Sobic003G338900 Sobic008G016900 Sobic008G016900 Sobic002G379400--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G379400--Sobic010G228000 Sobic002G118600 Sobic002G118600 Sobic002G379400--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G379400--Sobic006G263100 Sobic001G436000 Sobic001G436000 Sobic002G379400--Sobic001G436000 Sobic002G379400--Sobic002G294700 Sobic010G238800 Sobic010G238800 Sobic003G108200--Sobic010G238800 Sobic010G225100 Sobic010G225100 Sobic003G108200--Sobic010G225100 Sobic001G526200 Sobic001G526200 Sobic003G108200--Sobic001G526200 Sobic003G108200--Sobic002G272900 Sobic004G325700 Sobic004G325700 Sobic003G108200--Sobic004G325700 Sobic008G161000 Sobic008G161000 Sobic003G108200--Sobic008G161000 Sobic004G257300 Sobic004G257300 Sobic003G108200--Sobic004G257300 Sobic004G152400 Sobic004G152400 Sobic003G108200--Sobic004G152400 Sobic009G065000 Sobic009G065000 Sobic003G108200--Sobic009G065000 Sobic008G177800 Sobic008G177800 Sobic002G294700--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic007G124301 Sobic007G124301 Sobic002G272900--Sobic007G124301 Sobic001G516600 Sobic001G516600 Sobic002G272900--Sobic001G516600 Sobic002G272900--Sobic001G483400 Sobic001G389000 Sobic001G389000 Sobic002G272900--Sobic001G389000 Sobic010G213400 Sobic010G213400 Sobic002G272900--Sobic010G213400 Sobic003G037800 Sobic003G037800 Sobic002G272900--Sobic003G037800 Sobic009G033700 Sobic009G033700 Sobic002G272900--Sobic009G033700 Sobic007G151100 Sobic007G151100 Sobic002G272900--Sobic007G151100 Sobic003G249800 Sobic003G249800 Sobic002G272900--Sobic003G249800 Sobic001G051800--Sobic009G220200 Sobic001G290400 Sobic001G290400 Sobic001G051800--Sobic001G290400 Sobic001G051800--Sobic003G338900 Sobic009G071800 Sobic009G071800 Sobic001G051800--Sobic009G071800 Sobic002G203000 Sobic002G203000 Sobic001G051800--Sobic002G203000 Sobic003G296700 Sobic003G296700 Sobic001G051800--Sobic003G296700 Sobic009G208800 Sobic009G208800 Sobic001G051800--Sobic009G208800 Sobic001G051800--Sobic002G294700 Sobic001G473900 Sobic001G473900 Sobic001G051800--Sobic001G473900 Sobic001G189700 Sobic001G189700 Sobic003G338900--Sobic001G189700 Sobic010G076600 Sobic010G076600 Sobic003G338900--Sobic010G076600 Sobic009G217600 Sobic009G217600 Sobic003G338900--Sobic009G217600 Sobic003G338900--Sobic002G379400 Sobic001G476400 Sobic001G476400 Sobic003G338900--Sobic001G476400 Sobic001G341600 Sobic001G341600 Sobic003G338900--Sobic001G341600 Sobic003G338900--Sobic001G290400 Sobic003G338900--Sobic003G296700 Sobic003G338900--Sobic001G473900 Sobic005G010200 Sobic005G010200 Sobic001G483400--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic002G174200 Sobic002G174200 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic006G230900 Sobic006G230900 Sobic001G483400--Sobic006G230900 Sobic006G190500 Sobic006G190500 Sobic001G483400--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic004G036600--Sobic002G294700 Sobic004G036600--Sobic008G177800 Sobic004G036600--Sobic006G231100 Sobic001G173300 Sobic001G173300 Sobic004G036600--Sobic001G173300 Sobic004G036600--Sobic010G234600 Sobic004G036600--Sobic001G516600 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic009G217000 Sobic009G217000 Sobic004G036600--Sobic009G217000
Octagon: transcription factors


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