Gene annotation
Transcriptome id Sobic.007G124301.1
Synonym -
Functional annotation -
UniProt A0A1Z5R9G6
Pfam PF05678
Panther DB PTHR33179 PTHR33179:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39720 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os08g31660.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031020 , Zm00025a019105 , Zm00025a046724 , Zm00025a052086 , Zm00025a013820 , Zm00025a048807
Brachypodium KQJ98225 , KQK21459 , KQJ93567 , KQJ90035
Barley HORVU3Hr1G003880.1 , HORVU3Hr1G003880.2 , HORVU5Hr1G058170.1
Wheat TraesCS3D02G036600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
2 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
3 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
4 Sobic.003G037800 transferase family protein, putative, expressed -
5 Sobic.002G202600 joka8, putative, expressed -
6 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
7 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
8 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
9 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
11 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
12 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
13 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.006G046900 expressed protein -
15 Sobic.001G432000 LYR motif containing protein, putative, expressed -
16 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
17 Sobic.002G356101 - -
18 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
19 Sobic.010G086200 GRAM domain containing protein, expressed -
20 Sobic.004G259366 - -


Gene co-expression network
sample Sobic007G124301 Sobic007G124301 Sobic002G272900 Sobic002G272900 Sobic007G124301--Sobic002G272900 Sobic010G052200 Sobic010G052200 Sobic007G124301--Sobic010G052200 Sobic001G389000 Sobic001G389000 Sobic007G124301--Sobic001G389000 Sobic003G037800 Sobic003G037800 Sobic007G124301--Sobic003G037800 Sobic002G202600 Sobic002G202600 Sobic007G124301--Sobic002G202600 Sobic001G459800 Sobic001G459800 Sobic007G124301--Sobic001G459800 Sobic001G483400 Sobic001G483400 Sobic007G124301--Sobic001G483400 Sobic009G183300 Sobic009G183300 Sobic007G124301--Sobic009G183300 Sobic009G073300 Sobic009G073300 Sobic007G124301--Sobic009G073300 Sobic002G272900--Sobic007G124301 Sobic001G516600 Sobic001G516600 Sobic002G272900--Sobic001G516600 Sobic002G272900--Sobic001G483400 Sobic002G272900--Sobic001G389000 Sobic010G213400 Sobic010G213400 Sobic002G272900--Sobic010G213400 Sobic002G272900--Sobic003G037800 Sobic009G033700 Sobic009G033700 Sobic002G272900--Sobic009G033700 Sobic007G151100 Sobic007G151100 Sobic002G272900--Sobic007G151100 Sobic003G249800 Sobic003G249800 Sobic002G272900--Sobic003G249800 Sobic004G212300 Sobic004G212300 Sobic010G052200--Sobic004G212300 Sobic001G084100 Sobic001G084100 Sobic010G052200--Sobic001G084100 Sobic001G532200 Sobic001G532200 Sobic010G052200--Sobic001G532200 Sobic002G128800 Sobic002G128800 Sobic010G052200--Sobic002G128800 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic010G052200--Sobic003G037800 Sobic005G113300 Sobic005G113300 Sobic010G052200--Sobic005G113300 Sobic006G156000 Sobic006G156000 Sobic010G052200--Sobic006G156000 Sobic009G159400 Sobic009G159400 Sobic001G389000--Sobic009G159400 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic003G429000 Sobic003G429000 Sobic001G389000--Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic002G245100 Sobic002G245100 Sobic003G037800--Sobic002G245100 Sobic003G037800--Sobic001G389000 Sobic003G037800--Sobic009G033700 Sobic003G037800--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic004G321300 Sobic004G321300 Sobic003G037800--Sobic004G321300 Sobic003G037800--Sobic004G340900 Sobic002G202600--Sobic002G245100 Sobic001G119000 Sobic001G119000 Sobic002G202600--Sobic001G119000 Sobic002G202600--Sobic003G037800 Sobic002G202600--Sobic001G389000 Sobic003G430400 Sobic003G430400 Sobic002G202600--Sobic003G430400 Sobic003G158500 Sobic003G158500 Sobic002G202600--Sobic003G158500 Sobic002G202600--Sobic003G429000 Sobic002G202600--Sobic009G159400 Sobic002G202600--Sobic005G018700 Sobic001G391500 Sobic001G391500 Sobic001G459800--Sobic001G391500 Sobic006G267200 Sobic006G267200 Sobic001G459800--Sobic006G267200 Sobic004G141200 Sobic004G141200 Sobic001G459800--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic004G065500 Sobic004G065500 Sobic001G459800--Sobic004G065500 Sobic001G138600 Sobic001G138600 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic005G010200 Sobic005G010200 Sobic001G483400--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic002G174200 Sobic002G174200 Sobic001G483400--Sobic002G174200 Sobic001G483400--Sobic004G065500 Sobic006G230900 Sobic006G230900 Sobic001G483400--Sobic006G230900 Sobic006G190500 Sobic006G190500 Sobic001G483400--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic009G183300--Sobic004G065500 Sobic003G387000 Sobic003G387000 Sobic009G183300--Sobic003G387000 Sobic010G086200 Sobic010G086200 Sobic009G183300--Sobic010G086200 Sobic007G107850 Sobic007G107850 Sobic009G183300--Sobic007G107850 Sobic009G183300--Sobic009G129000 Sobic006G231100 Sobic006G231100 Sobic009G183300--Sobic006G231100 Sobic009G183300--Sobic006G267200 Sobic006G231200 Sobic006G231200 Sobic009G183300--Sobic006G231200 Sobic008G177800 Sobic008G177800 Sobic009G183300--Sobic008G177800 Sobic009G073300--Sobic001G532200 Sobic004G286600 Sobic004G286600 Sobic009G073300--Sobic004G286600 Sobic009G073300--Sobic008G177800 Sobic001G437000 Sobic001G437000 Sobic009G073300--Sobic001G437000 Sobic009G073300--Sobic006G231100 Sobic007G057100 Sobic007G057100 Sobic009G073300--Sobic007G057100 Sobic009G073300--Sobic001G516600 Sobic006G194100 Sobic006G194100 Sobic009G073300--Sobic006G194100 Sobic001G173300 Sobic001G173300 Sobic009G073300--Sobic001G173300
Octagon: transcription factors


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