Gene annotation
Transcriptome id Sobic.010G238800.1
Synonym IRX14-L, I14H
Functional annotation glycosyltransferase family 43 protein, putative, expressed
UniProt A0A1W0VUK3
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF17
NCBI CDD KOG1476; Beta-1,3-glucuronyltransferase B3GAT1/SQV-8
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G67230 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os06g47340.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a018204 , Zm00025a018970 , Zm00025a041838
Brachypodium KQK17261
Barley HORVU7Hr1G100490.1 , HORVU7Hr1G100490.3 , HORVU7Hr1G100490.2 , HORVU7Hr1G100490.4
Wheat TraesCS7A02G441400 , TraesCS7B02G340100 , TraesCS7D02G430700
Populus -


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cDNA sequences
Sobic.010G238800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G220100 exostosin family domain containing protein, expressed -
2 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
3 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
4 Sobic.003G344600 BAG domain containing protein, expressed -
5 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
6 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
7 Sobic.002G128800 fiber protein Fb34, putative, expressed -
8 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
9 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
10 Sobic.007G124301 - -
11 Sobic.003G219800 transferase family protein, putative, expressed -
12 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
13 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
14 Sobic.001G432000 LYR motif containing protein, putative, expressed -
15 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
16 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
17 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
18 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
19 Sobic.002G393400 chaperonin, putative, expressed K04078: groES, chaperonin GroES
20 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -


Gene co-expression network
sample Sobic010G238800 Sobic010G238800 Sobic009G220100 Sobic009G220100 Sobic010G238800--Sobic009G220100 Sobic006G156000 Sobic006G156000 Sobic010G238800--Sobic006G156000 Sobic010G052200 Sobic010G052200 Sobic010G238800--Sobic010G052200 Sobic003G344600 Sobic003G344600 Sobic010G238800--Sobic003G344600 Sobic008G103700 Sobic008G103700 Sobic010G238800--Sobic008G103700 Sobic003G443300 Sobic003G443300 Sobic010G238800--Sobic003G443300 Sobic002G128800 Sobic002G128800 Sobic010G238800--Sobic002G128800 Sobic005G168100 Sobic005G168100 Sobic010G238800--Sobic005G168100 Sobic001G084100 Sobic001G084100 Sobic010G238800--Sobic001G084100 Sobic009G220100--Sobic010G238800 Sobic003G410800 Sobic003G410800 Sobic009G220100--Sobic003G410800 Sobic001G418100 Sobic001G418100 Sobic009G220100--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic009G220100--Sobic009G181800 Sobic003G219800 Sobic003G219800 Sobic009G220100--Sobic003G219800 Sobic001G409100 Sobic001G409100 Sobic009G220100--Sobic001G409100 Sobic002G396400 Sobic002G396400 Sobic009G220100--Sobic002G396400 Sobic004G221300 Sobic004G221300 Sobic009G220100--Sobic004G221300 Sobic009G220100--Sobic002G128800 Sobic006G156000--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic006G156000--Sobic001G432000 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic009G212200 Sobic009G212200 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic004G212300 Sobic004G212300 Sobic010G052200--Sobic004G212300 Sobic010G052200--Sobic001G084100 Sobic001G532200 Sobic001G532200 Sobic010G052200--Sobic001G532200 Sobic010G052200--Sobic002G128800 Sobic007G124301 Sobic007G124301 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic003G037800 Sobic003G037800 Sobic010G052200--Sobic003G037800 Sobic005G113300 Sobic005G113300 Sobic010G052200--Sobic005G113300 Sobic010G052200--Sobic006G156000 Sobic003G249800 Sobic003G249800 Sobic003G344600--Sobic003G249800 Sobic001G009500 Sobic001G009500 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic002G282400 Sobic002G282400 Sobic003G344600--Sobic002G282400 Sobic002G335300 Sobic002G335300 Sobic003G344600--Sobic002G335300 Sobic002G330000 Sobic002G330000 Sobic003G344600--Sobic002G330000 Sobic010G237000 Sobic010G237000 Sobic003G344600--Sobic010G237000 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic008G103700--Sobic010G238800 Sobic003G306100 Sobic003G306100 Sobic008G103700--Sobic003G306100 Sobic008G103700--Sobic003G344600 Sobic008G103700--Sobic003G443300 Sobic008G103700--Sobic002G335300 Sobic008G103700--Sobic002G128800 Sobic008G103700--Sobic001G432000 Sobic003G443300--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic001G475500 Sobic001G475500 Sobic002G128800--Sobic001G475500 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300 Sobic009G232900 Sobic009G232900 Sobic005G168100--Sobic009G232900 Sobic005G168100--Sobic001G432000 Sobic005G168100--Sobic006G156000 Sobic003G155400 Sobic003G155400 Sobic005G168100--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic005G168100--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic005G168100--Sobic002G296200 Sobic002G418400 Sobic002G418400 Sobic005G168100--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic005G168100--Sobic003G215700 Sobic003G150000 Sobic003G150000 Sobic005G168100--Sobic003G150000 Sobic001G084100--Sobic001G532200 Sobic001G173300 Sobic001G173300 Sobic001G084100--Sobic001G173300 Sobic001G084100--Sobic006G156000 Sobic001G084100--Sobic010G052200 Sobic001G084100--Sobic005G168100 Sobic001G084100--Sobic004G212300 Sobic003G119500 Sobic003G119500 Sobic001G084100--Sobic003G119500 Sobic001G084100--Sobic003G219800 Sobic001G084100--Sobic001G418100
Octagon: transcription factors


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