Gene annotation
Transcriptome id Sobic.002G124700.1
Synonym 2, PIP2;2, PIP2, PIP2B, SbPIP2;2;PIP aquaporin, Sb02g010760, SbPIP2;2;plasma membrane intrinsic protein/aquaporin, PIP aquaporin
Functional annotation up-regulated by silicon application (PubMedID : 24879770)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-regulated by osmotic stress. (PubMedID : 24879770)
aquaporin protein, putative, expressed
UniProt C5X548
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF137
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G37170 : plasma membrane intrinsic protein 2
RAP-DB (Rice) LOC_Os07g26690.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a022816 , Zm00025a021083 , Zm00025a045837 , Zm00025a032042 , Zm00025a010237 , Zm00025a049307 , Zm00025a032750 , Zm00025a010642 , Zm00025a049510 , Zm00025a013555 , Zm00025a013554 , Zm00025a017913
Brachypodium KQK03428 , KQJ84016 , KQJ83644 , KQJ91256 , KQK00428 , KQJ95667 , KQK16443 , KQK16441
Barley HORVU2Hr1G089820.11 , HORVU2Hr1G089820.10 , HORVU2Hr1G089940.3 , HORVU5Hr1G029550.1 , HORVU5Hr1G029550.2 , HORVU5Hr1G029550.3 , HORVU5Hr1G029550.4 , HORVU5Hr1G029550.5 , HORVU5Hr1G029550.6 , HORVU5Hr1G029550.7 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU5Hr1G027240.3 , HORVU5Hr1G027240.1 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.13 , HORVU2Hr1G038740.10 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.16 , HORVU2Hr1G038740.17 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15 , HORVU2Hr1G038740.18 , HORVU5Hr1G084230.1 , HORVU5Hr1G084230.2 , HORVU5Hr1G084230.4 , HORVU2Hr1G096360.6 , HORVU2Hr1G096360.4 , HORVU2Hr1G096360.5 , HORVU2Hr1G096360.2 , HORVU2Hr1G096360.3 , HORVU2Hr1G096360.1 , HORVU2Hr1G096360.8 , HORVU2Hr1G096360.9 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU2Hr1G038740.2 , HORVU2Hr1G038740.3 , HORVU2Hr1G038740.5 , HORVU2Hr1G038740.6 , HORVU2Hr1G038740.7 , HORVU2Hr1G089820.5 , HORVU2Hr1G089820.4 , HORVU2Hr1G089820.7 , HORVU2Hr1G089820.6 , HORVU2Hr1G089820.1 , HORVU2Hr1G089820.3 , HORVU2Hr1G089820.2 , HORVU2Hr1G089820.9 , HORVU2Hr1G089820.8 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.1 , HORVU6Hr1G058930.3 , HORVU0Hr1G011280.6 , HORVU0Hr1G011280.4 , HORVU0Hr1G011280.5 , HORVU0Hr1G011280.2 , HORVU0Hr1G011280.3 , HORVU0Hr1G011280.1 , HORVU2Hr1G096360.15 , HORVU2Hr1G096360.16 , HORVU2Hr1G096360.10 , HORVU2Hr1G096360.11 , HORVU2Hr1G096360.12 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089970.2 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.8 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU2Hr1G089940.1 , HORVU0Hr1G014490.4 , HORVU0Hr1G014490.6 , HORVU0Hr1G014490.7 , HORVU0Hr1G014490.1 , HORVU0Hr1G014490.2 , HORVU0Hr1G014490.3 , HORVU2Hr1G089940.21 , HORVU2Hr1G089940.20 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16 , HORVU6Hr1G014300.2 , HORVU6Hr1G014300.1
Wheat TraesCS2D02G376100 , TraesCS6B02G398000 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS2B02G605900 , TraesCS4A02G286200 , TraesCS5B02G332500 , TraesCS2D02G206300 , TraesCS7A02G191200 , TraesCS4B02G027600 , TraesCS3D02G163400 , TraesCS6D02G212900 , TraesCS7D02G192200 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5D02G112500 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS5D02G338200 , TraesCS2D02G404800 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS5A02G332300 , TraesCS6A02G222100 , TraesCS2B02G396800 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2B02G077700 , TraesCS2A02G065700 , TraesCS7B02G096000 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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cDNA sequences
Sobic.002G124700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G257300 GPI-anchored protein, putative, expressed -
2 Sobic.006G176700 similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
3 Sobic.003G305601 - -
4 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
5 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
6 Sobic.004G288700 similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
7 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
8 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
9 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
11 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
12 Sobic.008G119400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
13 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
15 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
16 Sobic.003G338900 expressed protein -
17 Sobic.003G392200 CXE carboxylesterase, putative, expressed -
18 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
19 Sobic.002G210300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hypro1, putative, expressed -
20 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -


Gene co-expression network
sample Sobic002G124700 Sobic002G124700 Sobic004G257300 Sobic004G257300 Sobic002G124700--Sobic004G257300 Sobic006G176700 Sobic006G176700 Sobic002G124700--Sobic006G176700 Sobic003G305601 Sobic003G305601 Sobic002G124700--Sobic003G305601 Sobic002G270000 Sobic002G270000 Sobic002G124700--Sobic002G270000 Sobic001G217000 Sobic001G217000 Sobic002G124700--Sobic001G217000 Sobic004G288700 Sobic004G288700 Sobic002G124700--Sobic004G288700 Sobic009G195900 Sobic009G195900 Sobic002G124700--Sobic009G195900 Sobic001G084100 Sobic001G084100 Sobic002G124700--Sobic001G084100 Sobic003G108200 Sobic003G108200 Sobic002G124700--Sobic003G108200 Sobic001G173300 Sobic001G173300 Sobic004G257300--Sobic001G173300 Sobic010G030900 Sobic010G030900 Sobic004G257300--Sobic010G030900 Sobic009G208800 Sobic009G208800 Sobic004G257300--Sobic009G208800 Sobic002G294700 Sobic002G294700 Sobic004G257300--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic004G257300--Sobic008G177800 Sobic004G036600 Sobic004G036600 Sobic004G257300--Sobic004G036600 Sobic006G205600 Sobic006G205600 Sobic004G257300--Sobic006G205600 Sobic004G286600 Sobic004G286600 Sobic004G257300--Sobic004G286600 Sobic001G489600 Sobic001G489600 Sobic004G257300--Sobic001G489600 Sobic006G176700--Sobic004G288700 Sobic004G222000 Sobic004G222000 Sobic006G176700--Sobic004G222000 Sobic006G176700--Sobic002G124700 Sobic006G176700--Sobic003G305601 Sobic001G505100 Sobic001G505100 Sobic006G176700--Sobic001G505100 Sobic009G215000 Sobic009G215000 Sobic006G176700--Sobic009G215000 Sobic006G176700--Sobic001G084100 Sobic006G176700--Sobic002G270000 Sobic004G334800 Sobic004G334800 Sobic006G176700--Sobic004G334800 Sobic006G156000 Sobic006G156000 Sobic003G305601--Sobic006G156000 Sobic004G212300 Sobic004G212300 Sobic003G305601--Sobic004G212300 Sobic003G305601--Sobic001G084100 Sobic005G168100 Sobic005G168100 Sobic003G305601--Sobic005G168100 Sobic002G343500 Sobic002G343500 Sobic003G305601--Sobic002G343500 Sobic002G210300 Sobic002G210300 Sobic003G305601--Sobic002G210300 Sobic003G305601--Sobic004G334800 Sobic001G113700 Sobic001G113700 Sobic003G305601--Sobic001G113700 Sobic009G220200 Sobic009G220200 Sobic003G305601--Sobic009G220200 Sobic002G270000--Sobic001G084100 Sobic002G128800 Sobic002G128800 Sobic002G270000--Sobic002G128800 Sobic010G238800 Sobic010G238800 Sobic002G270000--Sobic010G238800 Sobic001G063500 Sobic001G063500 Sobic002G270000--Sobic001G063500 Sobic002G270000--Sobic009G215000 Sobic002G252000 Sobic002G252000 Sobic002G270000--Sobic002G252000 Sobic002G270000--Sobic006G156000 Sobic002G396400 Sobic002G396400 Sobic002G270000--Sobic002G396400 Sobic010G052200 Sobic010G052200 Sobic002G270000--Sobic010G052200 Sobic001G473900 Sobic001G473900 Sobic001G217000--Sobic001G473900 Sobic001G217000--Sobic001G113700 Sobic002G379400 Sobic002G379400 Sobic001G217000--Sobic002G379400 Sobic010G076600 Sobic010G076600 Sobic001G217000--Sobic010G076600 Sobic003G338900 Sobic003G338900 Sobic001G217000--Sobic003G338900 Sobic001G217000--Sobic002G210300 Sobic001G217000--Sobic009G208800 Sobic001G217000--Sobic004G257300 Sobic001G217000--Sobic009G220200 Sobic004G288700--Sobic006G176700 Sobic003G373100 Sobic003G373100 Sobic004G288700--Sobic003G373100 Sobic004G288700--Sobic004G222000 Sobic004G288700--Sobic002G270000 Sobic004G288700--Sobic002G124700 Sobic004G288700--Sobic001G084100 Sobic009G002400 Sobic009G002400 Sobic004G288700--Sobic009G002400 Sobic001G294400 Sobic001G294400 Sobic004G288700--Sobic001G294400 Sobic009G073300 Sobic009G073300 Sobic004G288700--Sobic009G073300 Sobic008G188700 Sobic008G188700 Sobic009G195900--Sobic008G188700 Sobic008G016900 Sobic008G016900 Sobic009G195900--Sobic008G016900 Sobic007G178200 Sobic007G178200 Sobic009G195900--Sobic007G178200 Sobic009G195900--Sobic004G257300 Sobic002G330300 Sobic002G330300 Sobic009G195900--Sobic002G330300 Sobic009G195900--Sobic002G124700 Sobic001G416600 Sobic001G416600 Sobic009G195900--Sobic001G416600 Sobic002G270700 Sobic002G270700 Sobic009G195900--Sobic002G270700 Sobic009G195900--Sobic001G217000 Sobic001G532200 Sobic001G532200 Sobic001G084100--Sobic001G532200 Sobic001G084100--Sobic001G173300 Sobic001G084100--Sobic006G156000 Sobic001G084100--Sobic010G052200 Sobic001G084100--Sobic005G168100 Sobic001G084100--Sobic004G212300 Sobic003G119500 Sobic003G119500 Sobic001G084100--Sobic003G119500 Sobic003G219800 Sobic003G219800 Sobic001G084100--Sobic003G219800 Sobic001G418100 Sobic001G418100 Sobic001G084100--Sobic001G418100 Sobic003G108200--Sobic010G238800 Sobic010G225100 Sobic010G225100 Sobic003G108200--Sobic010G225100 Sobic001G526200 Sobic001G526200 Sobic003G108200--Sobic001G526200 Sobic002G272900 Sobic002G272900 Sobic003G108200--Sobic002G272900 Sobic004G325700 Sobic004G325700 Sobic003G108200--Sobic004G325700 Sobic008G161000 Sobic008G161000 Sobic003G108200--Sobic008G161000 Sobic003G108200--Sobic004G257300 Sobic004G152400 Sobic004G152400 Sobic003G108200--Sobic004G152400 Sobic009G065000 Sobic009G065000 Sobic003G108200--Sobic009G065000
Octagon: transcription factors


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