Gene annotation
Transcriptome id Sobic.001G436100.1
Synonym Sb01g041030, GAE2
Functional annotation UDP-glucuronate 4-epimerase, putative, expressed
UniProt C5WQX4
Pfam PF04321
Panther DB PTHR10366 PTHR10366:SF319
NCBI CDD KOG1371; UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
KEGG Orthology K08679; UDP-glucuronate 4-epimerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02000 : UDP-D-glucuronate 4-epimerase 2
RAP-DB (Rice) LOC_Os03g14540.1 : UDP-glucuronate 4-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a001579 , Zm00025a052877
Brachypodium KQK22561
Barley HORVU4Hr1G063010.2 , HORVU4Hr1G063010.3 , HORVU4Hr1G063010.1 , HORVU4Hr1G063010.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
2 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
3 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
4 Sobic.001G026600 - -
5 Sobic.004G331900 transmembrane 9 superfamily member, putative, expressed -
6 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.001G313301 - -
8 Sobic.004G333100 expressed protein -
9 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
10 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -
11 Sobic.002G332100 expressed protein -
12 Sobic.001G108400 LRR receptor-like protein kinase, putative, expressed -
13 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
14 Sobic.003G410700 exostosin family domain containing protein, expressed -
15 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
16 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
17 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
19 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
20 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta


Gene co-expression network
sample Sobic001G436100 Sobic001G436100 Sobic001G116000 Sobic001G116000 Sobic001G436100--Sobic001G116000 Sobic001G196100 Sobic001G196100 Sobic001G436100--Sobic001G196100 Sobic009G194200 Sobic009G194200 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic002G075500 Sobic002G075500 Sobic001G436100--Sobic002G075500 Sobic001G313301 Sobic001G313301 Sobic001G436100--Sobic001G313301 Sobic004G333100 Sobic004G333100 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000 Sobic001G116000--Sobic001G196100 Sobic001G035400 Sobic001G035400 Sobic001G116000--Sobic001G035400 Sobic007G044400 Sobic007G044400 Sobic001G116000--Sobic007G044400 Sobic007G048700 Sobic007G048700 Sobic001G116000--Sobic007G048700 Sobic002G313600 Sobic002G313600 Sobic001G116000--Sobic002G313600 Sobic008G084100 Sobic008G084100 Sobic001G116000--Sobic008G084100 Sobic001G116000--Sobic001G026600 Sobic004G031800 Sobic004G031800 Sobic001G116000--Sobic004G031800 Sobic004G184000 Sobic004G184000 Sobic001G116000--Sobic004G184000 Sobic001G196100--Sobic001G116000 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic002G087000 Sobic002G087000 Sobic001G196100--Sobic002G087000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic010G008600 Sobic010G008600 Sobic009G194200--Sobic010G008600 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic001G026600--Sobic001G530800 Sobic001G026600--Sobic007G044400 Sobic010G277000 Sobic010G277000 Sobic001G026600--Sobic010G277000 Sobic001G026600--Sobic001G196100 Sobic001G026600--Sobic001G116000 Sobic001G026600--Sobic008G084100 Sobic001G026600--Sobic003G319000 Sobic001G026600--Sobic002G313600 Sobic001G026600--Sobic001G436100 Sobic003G348200 Sobic003G348200 Sobic004G331900--Sobic003G348200 Sobic003G327600 Sobic003G327600 Sobic004G331900--Sobic003G327600 Sobic003G424300 Sobic003G424300 Sobic004G331900--Sobic003G424300 Sobic004G331900--Sobic001G436100 Sobic010G248000 Sobic010G248000 Sobic004G331900--Sobic010G248000 Sobic004G151200 Sobic004G151200 Sobic004G331900--Sobic004G151200 Sobic004G358900 Sobic004G358900 Sobic004G331900--Sobic004G358900 Sobic004G331900--Sobic001G116000 Sobic004G331900--Sobic004G184000 Sobic009G063400 Sobic009G063400 Sobic002G075500--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic002G075500--Sobic009G125900 Sobic002G118700 Sobic002G118700 Sobic002G075500--Sobic002G118700 Sobic009G026101 Sobic009G026101 Sobic002G075500--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G075500--Sobic004G051300 Sobic001G099100 Sobic001G099100 Sobic002G075500--Sobic001G099100 Sobic007G180900 Sobic007G180900 Sobic002G075500--Sobic007G180900 Sobic003G254700 Sobic003G254700 Sobic002G075500--Sobic003G254700 Sobic006G156600 Sobic006G156600 Sobic002G075500--Sobic006G156600 Sobic001G313301--Sobic001G436100 Sobic001G313301--Sobic002G075500 Sobic004G265600 Sobic004G265600 Sobic001G313301--Sobic004G265600 Sobic001G313301--Sobic004G051300 Sobic001G313301--Sobic009G125900 Sobic008G043500 Sobic008G043500 Sobic001G313301--Sobic008G043500 Sobic001G313301--Sobic001G099100 Sobic009G073400 Sobic009G073400 Sobic001G313301--Sobic009G073400 Sobic010G090500 Sobic010G090500 Sobic001G313301--Sobic010G090500 Sobic004G333100--Sobic001G436100 Sobic004G333100--Sobic002G075500 Sobic004G333100--Sobic001G418000 Sobic004G303600 Sobic004G303600 Sobic004G333100--Sobic004G303600 Sobic003G055900 Sobic003G055900 Sobic004G333100--Sobic003G055900 Sobic010G165200 Sobic010G165200 Sobic004G333100--Sobic010G165200 Sobic002G252000 Sobic002G252000 Sobic004G333100--Sobic002G252000 Sobic004G333100--Sobic009G194200 Sobic004G333100--Sobic008G043500 Sobic003G319000--Sobic001G196100 Sobic003G092700 Sobic003G092700 Sobic003G319000--Sobic003G092700 Sobic009G182200 Sobic009G182200 Sobic003G319000--Sobic009G182200 Sobic003G319000--Sobic001G026600 Sobic003G252900 Sobic003G252900 Sobic003G319000--Sobic003G252900 Sobic003G312400 Sobic003G312400 Sobic003G319000--Sobic003G312400 Sobic003G319000--Sobic001G418000 Sobic003G410400 Sobic003G410400 Sobic003G319000--Sobic003G410400 Sobic003G023500 Sobic003G023500 Sobic003G319000--Sobic003G023500
Octagon: transcription factors


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