Gene annotation
Transcriptome id Sobic.008G043500.1
Synonym Sb08g003720
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5YS71
Pfam PF03168
Panther DB PTHR31415 PTHR31415:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44220 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os12g06260.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053953 , Zm00025a025793 , Zm00025a033680
Brachypodium KQJ89363 , KQJ92163
Barley HORVU4Hr1G021190.1 , HORVU4Hr1G021190.2 , HORVU5Hr1G040160.1 , HORVU5Hr1G040160.2 , HORVU5Hr1G040160.3 , HORVU5Hr1G040160.4 , HORVU5Hr1G040160.5 , HORVU5Hr1G040160.6
Wheat TraesCS5B02G125000 , TraesCS5A02G125800 , TraesCS5D02G133400
Populus -


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cDNA sequences
Sobic.008G043500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G159100 exostosin family domain containing protein, expressed -
2 Sobic.002G271300 NC domain-containing protein, putative, expressed -
3 Sobic.001G313301 - -
4 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
6 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.001G008900 - -
8 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
9 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
10 Sobic.001G063500 fasciclin domain containing protein, expressed -
11 Sobic.010G180100 transferase family protein, putative, expressed -
12 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
14 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
15 Sobic.003G055900 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
16 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
17 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
18 Sobic.010G018500 expressed protein -
19 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
20 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase


Gene co-expression network
sample Sobic008G043500 Sobic008G043500 Sobic004G159100 Sobic004G159100 Sobic008G043500--Sobic004G159100 Sobic002G271300 Sobic002G271300 Sobic008G043500--Sobic002G271300 Sobic001G313301 Sobic001G313301 Sobic008G043500--Sobic001G313301 Sobic001G133900 Sobic001G133900 Sobic008G043500--Sobic001G133900 Sobic002G252000 Sobic002G252000 Sobic008G043500--Sobic002G252000 Sobic003G444200 Sobic003G444200 Sobic008G043500--Sobic003G444200 Sobic001G008900 Sobic001G008900 Sobic008G043500--Sobic001G008900 Sobic003G161500 Sobic003G161500 Sobic008G043500--Sobic003G161500 Sobic001G436100 Sobic001G436100 Sobic008G043500--Sobic001G436100 Sobic002G384000 Sobic002G384000 Sobic004G159100--Sobic002G384000 Sobic001G452200 Sobic001G452200 Sobic004G159100--Sobic001G452200 Sobic002G107400 Sobic002G107400 Sobic004G159100--Sobic002G107400 Sobic010G170300 Sobic010G170300 Sobic004G159100--Sobic010G170300 Sobic004G159100--Sobic008G043500 Sobic010G180100 Sobic010G180100 Sobic004G159100--Sobic010G180100 Sobic002G374650 Sobic002G374650 Sobic004G159100--Sobic002G374650 Sobic003G015200 Sobic003G015200 Sobic004G159100--Sobic003G015200 Sobic001G026300 Sobic001G026300 Sobic004G159100--Sobic001G026300 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic001G313301--Sobic001G436100 Sobic002G075500 Sobic002G075500 Sobic001G313301--Sobic002G075500 Sobic004G265600 Sobic004G265600 Sobic001G313301--Sobic004G265600 Sobic004G051300 Sobic004G051300 Sobic001G313301--Sobic004G051300 Sobic009G125900 Sobic009G125900 Sobic001G313301--Sobic009G125900 Sobic001G313301--Sobic008G043500 Sobic001G099100 Sobic001G099100 Sobic001G313301--Sobic001G099100 Sobic009G073400 Sobic009G073400 Sobic001G313301--Sobic009G073400 Sobic010G090500 Sobic010G090500 Sobic001G313301--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic001G133900--Sobic009G026101 Sobic009G246700 Sobic009G246700 Sobic001G133900--Sobic009G246700 Sobic004G007600 Sobic004G007600 Sobic001G133900--Sobic004G007600 Sobic003G254700 Sobic003G254700 Sobic001G133900--Sobic003G254700 Sobic001G133900--Sobic010G180100 Sobic004G111100 Sobic004G111100 Sobic001G133900--Sobic004G111100 Sobic001G133900--Sobic002G075500 Sobic009G079100 Sobic009G079100 Sobic001G133900--Sobic009G079100 Sobic001G133900--Sobic009G125900 Sobic002G128800 Sobic002G128800 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic006G156000 Sobic006G156000 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic006G102900 Sobic006G102900 Sobic003G444200--Sobic006G102900 Sobic001G401600 Sobic001G401600 Sobic003G444200--Sobic001G401600 Sobic009G189200 Sobic009G189200 Sobic003G444200--Sobic009G189200 Sobic010G101600 Sobic010G101600 Sobic003G444200--Sobic010G101600 Sobic010G089500 Sobic010G089500 Sobic003G444200--Sobic010G089500 Sobic002G232400 Sobic002G232400 Sobic003G444200--Sobic002G232400 Sobic003G444200--Sobic002G271300 Sobic008G084100 Sobic008G084100 Sobic003G444200--Sobic008G084100 Sobic002G111500 Sobic002G111500 Sobic003G444200--Sobic002G111500 Sobic003G100900 Sobic003G100900 Sobic001G008900--Sobic003G100900 Sobic006G282300 Sobic006G282300 Sobic001G008900--Sobic006G282300 Sobic001G008900--Sobic010G180100 Sobic005G096101 Sobic005G096101 Sobic001G008900--Sobic005G096101 Sobic002G094600 Sobic002G094600 Sobic001G008900--Sobic002G094600 Sobic001G008900--Sobic002G254900 Sobic010G101900 Sobic010G101900 Sobic001G008900--Sobic010G101900 Sobic001G002800 Sobic001G002800 Sobic001G008900--Sobic001G002800 Sobic001G008900--Sobic002G252000 Sobic004G274800 Sobic004G274800 Sobic003G161500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic003G161500--Sobic009G206500 Sobic006G281400 Sobic006G281400 Sobic003G161500--Sobic006G281400 Sobic002G318300 Sobic002G318300 Sobic003G161500--Sobic002G318300 Sobic003G052100 Sobic003G052100 Sobic003G161500--Sobic003G052100 Sobic008G032800 Sobic008G032800 Sobic003G161500--Sobic008G032800 Sobic007G139500 Sobic007G139500 Sobic003G161500--Sobic007G139500 Sobic006G109500 Sobic006G109500 Sobic003G161500--Sobic006G109500 Sobic003G369200 Sobic003G369200 Sobic003G161500--Sobic003G369200 Sobic001G116000 Sobic001G116000 Sobic001G436100--Sobic001G116000 Sobic001G196100 Sobic001G196100 Sobic001G436100--Sobic001G196100 Sobic009G194200 Sobic009G194200 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic001G436100--Sobic002G075500 Sobic001G436100--Sobic001G313301 Sobic004G333100 Sobic004G333100 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000
Octagon: transcription factors


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