Gene annotation
Transcriptome id Sobic.001G063500.1
Synonym Sb01g005770, FLA16
Functional annotation fasciclin domain containing protein, expressed
UniProt C5WY51
Pfam PF02469
Panther DB PTHR32499 PTHR32499:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06390 : FASCICLIN-like arabinogalactan protein 17 precursor
RAP-DB (Rice) LOC_Os03g57460.1 : fasciclin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016614 , Zm00025a008489
Brachypodium KQK20840 , KQK12835
Barley HORVU5Hr1G103850.6 , HORVU5Hr1G103850.7 , HORVU5Hr1G103850.4 , HORVU5Hr1G103850.5 , HORVU5Hr1G103850.2 , HORVU5Hr1G103850.3 , HORVU5Hr1G103850.1
Wheat TraesCS2B02G263900 , TraesCS2A02G248800 , TraesCS2D02G250500 , TraesCS5B02G428500 , TraesCS5A02G426600 , TraesCS5D02G434600
Populus -


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cDNA sequences
Sobic.001G063500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
2 Sobic.002G128800 fiber protein Fb34, putative, expressed -
3 Sobic.009G026101 - -
4 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
5 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.004G007600 glycosyltransferase protein, putative, expressed -
7 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
8 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.006G278100 expressed protein -
10 Sobic.010G180100 transferase family protein, putative, expressed -
11 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
12 Sobic.002G333800 CSLF8 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed K00770: 1,4-beta-D-xylan synthase
13 Sobic.001G008900 - -
14 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
15 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.009G215000 - -
17 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
20 Sobic.004G319600 polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic001G063500 Sobic001G063500 Sobic002G270000 Sobic002G270000 Sobic001G063500--Sobic002G270000 Sobic002G128800 Sobic002G128800 Sobic001G063500--Sobic002G128800 Sobic009G026101 Sobic009G026101 Sobic001G063500--Sobic009G026101 Sobic001G409100 Sobic001G409100 Sobic001G063500--Sobic001G409100 Sobic002G075500 Sobic002G075500 Sobic001G063500--Sobic002G075500 Sobic004G007600 Sobic004G007600 Sobic001G063500--Sobic004G007600 Sobic002G252000 Sobic002G252000 Sobic001G063500--Sobic002G252000 Sobic001G133900 Sobic001G133900 Sobic001G063500--Sobic001G133900 Sobic006G278100 Sobic006G278100 Sobic001G063500--Sobic006G278100 Sobic001G084100 Sobic001G084100 Sobic002G270000--Sobic001G084100 Sobic002G270000--Sobic002G128800 Sobic010G238800 Sobic010G238800 Sobic002G270000--Sobic010G238800 Sobic002G270000--Sobic001G063500 Sobic009G215000 Sobic009G215000 Sobic002G270000--Sobic009G215000 Sobic002G270000--Sobic002G252000 Sobic006G156000 Sobic006G156000 Sobic002G270000--Sobic006G156000 Sobic002G396400 Sobic002G396400 Sobic002G270000--Sobic002G396400 Sobic010G052200 Sobic010G052200 Sobic002G270000--Sobic010G052200 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic001G475500 Sobic001G475500 Sobic002G128800--Sobic001G475500 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic009G026101--Sobic001G133900 Sobic009G063400 Sobic009G063400 Sobic009G026101--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic009G026101--Sobic009G125900 Sobic009G246700 Sobic009G246700 Sobic009G026101--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G026101--Sobic009G206500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic003G254700 Sobic003G254700 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic001G409100--Sobic002G396400 Sobic003G410800 Sobic003G410800 Sobic001G409100--Sobic003G410800 Sobic004G221300 Sobic004G221300 Sobic001G409100--Sobic004G221300 Sobic006G036400 Sobic006G036400 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G224300 Sobic001G224300 Sobic001G409100--Sobic001G224300 Sobic001G038300 Sobic001G038300 Sobic001G409100--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic001G409100--Sobic010G180100 Sobic009G220100 Sobic009G220100 Sobic001G409100--Sobic009G220100 Sobic002G075500--Sobic009G063400 Sobic002G075500--Sobic009G125900 Sobic002G118700 Sobic002G118700 Sobic002G075500--Sobic002G118700 Sobic002G075500--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G075500--Sobic004G051300 Sobic001G099100 Sobic001G099100 Sobic002G075500--Sobic001G099100 Sobic007G180900 Sobic007G180900 Sobic002G075500--Sobic007G180900 Sobic002G075500--Sobic003G254700 Sobic006G156600 Sobic006G156600 Sobic002G075500--Sobic006G156600 Sobic004G007600--Sobic001G133900 Sobic004G007600--Sobic003G254700 Sobic004G007600--Sobic009G026101 Sobic004G319600 Sobic004G319600 Sobic004G007600--Sobic004G319600 Sobic004G111100 Sobic004G111100 Sobic004G007600--Sobic004G111100 Sobic004G007600--Sobic006G075000 Sobic004G007600--Sobic009G125900 Sobic004G007600--Sobic002G075500 Sobic004G007600--Sobic006G156600 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic002G252000--Sobic001G418100 Sobic002G252000--Sobic002G396400 Sobic002G252000--Sobic006G156000 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic002G252000--Sobic003G443300 Sobic002G252000--Sobic003G219800 Sobic001G133900--Sobic009G026101 Sobic001G133900--Sobic009G246700 Sobic001G133900--Sobic004G007600 Sobic001G133900--Sobic003G254700 Sobic001G133900--Sobic010G180100 Sobic001G133900--Sobic004G111100 Sobic001G133900--Sobic002G075500 Sobic009G079100 Sobic009G079100 Sobic001G133900--Sobic009G079100 Sobic001G133900--Sobic009G125900 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G191700 Sobic006G191700 Sobic006G278100--Sobic006G191700 Sobic001G261549 Sobic001G261549 Sobic006G278100--Sobic001G261549
Octagon: transcription factors


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