Gene annotation
Transcriptome id Sobic.003G127100.2
Synonym Sb03g010740
Functional annotation peroxidase precursor, putative, expressed
UniProt A0A109NDW7 , A0A1W0VX32 , A1E9V6
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF59
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT2G39040 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g16450.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a024093 , Zm00025a035243 , Zm00025a050983
Brachypodium KQK03846 , KQK04189 , KQK04190 , KQK18053 , KQK23930 , PNT66525 , PNT66526
Barley HORVU7Hr1G089320.3 , HORVU7Hr1G089320.2 , HORVU7Hr1G089320.1 , HORVU7Hr1G089320.4 , HORVU0Hr1G004850.2 , HORVU4Hr1G084910.1 , HORVU4Hr1G084910.3 , HORVU3Hr1G036790.1 , HORVU7Hr1G089310.1 , HORVU3Hr1G038290.2 , HORVU3Hr1G038290.1
Wheat TraesCS4D02G342500 , TraesCS3D02G189900 , TraesCS7D02G369500 , TraesCS7B02G274300 , TraesCS1A02G108400 , TraesCS3A02G185900 , TraesCS4B02G347600 , TraesCS5A02G516200 , TraesCS3B02G215500 , TraesCS3A02G180000 , TraesCS3A02G180000 , TraesCS7A02G353200
Populus -


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cDNA sequences
Sobic.003G127100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
2 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.008G168100 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
4 Sobic.010G101400 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
6 Sobic.001G063500 fasciclin domain containing protein, expressed -
7 Sobic.006G081600 expressed protein -
8 Sobic.004G033000 glycosyltransferase, putative, expressed -
9 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.010G030900 glycosyltransferase, putative, expressed -
11 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
12 Sobic.002G124700 up-regulated by silicon application(PubMedID : 24879770)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
13 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
14 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
16 Sobic.004G285600 ethylene-responsive protein related, putative, expressed -
17 Sobic.004G264600 expressed protein -
18 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
19 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G127100 Sobic003G127100 Sobic010G008600 Sobic010G008600 Sobic003G127100--Sobic010G008600 Sobic002G372800 Sobic002G372800 Sobic003G127100--Sobic002G372800 Sobic008G168100 Sobic008G168100 Sobic003G127100--Sobic008G168100 Sobic010G101400 Sobic010G101400 Sobic003G127100--Sobic010G101400 Sobic006G242100 Sobic006G242100 Sobic003G127100--Sobic006G242100 Sobic001G063500 Sobic001G063500 Sobic003G127100--Sobic001G063500 Sobic006G081600 Sobic006G081600 Sobic003G127100--Sobic006G081600 Sobic004G033000 Sobic004G033000 Sobic003G127100--Sobic004G033000 Sobic001G294400 Sobic001G294400 Sobic003G127100--Sobic001G294400 Sobic010G008600--Sobic003G127100 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G030900 Sobic010G030900 Sobic010G008600--Sobic010G030900 Sobic009G194200 Sobic009G194200 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic001G061900 Sobic001G061900 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic010G008600--Sobic002G372800 Sobic007G009500 Sobic007G009500 Sobic002G372800--Sobic007G009500 Sobic002G372800--Sobic003G127100 Sobic001G108350 Sobic001G108350 Sobic002G372800--Sobic001G108350 Sobic004G257800 Sobic004G257800 Sobic002G372800--Sobic004G257800 Sobic005G110490 Sobic005G110490 Sobic002G372800--Sobic005G110490 Sobic002G372800--Sobic001G063600 Sobic002G325900 Sobic002G325900 Sobic002G372800--Sobic002G325900 Sobic002G372800--Sobic006G242100 Sobic002G372800--Sobic010G008600 Sobic009G059500 Sobic009G059500 Sobic008G168100--Sobic009G059500 Sobic001G228200 Sobic001G228200 Sobic008G168100--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic008G168100--Sobic004G054000 Sobic003G294100 Sobic003G294100 Sobic008G168100--Sobic003G294100 Sobic002G271300 Sobic002G271300 Sobic008G168100--Sobic002G271300 Sobic009G250100 Sobic009G250100 Sobic008G168100--Sobic009G250100 Sobic008G126600 Sobic008G126600 Sobic008G168100--Sobic008G126600 Sobic002G094600 Sobic002G094600 Sobic008G168100--Sobic002G094600 Sobic007G152900 Sobic007G152900 Sobic008G168100--Sobic007G152900 Sobic010G101400--Sobic010G008600 Sobic008G119400 Sobic008G119400 Sobic010G101400--Sobic008G119400 Sobic007G216500 Sobic007G216500 Sobic010G101400--Sobic007G216500 Sobic010G101400--Sobic010G030900 Sobic010G101400--Sobic003G127100 Sobic002G113500 Sobic002G113500 Sobic010G101400--Sobic002G113500 Sobic010G101400--Sobic009G194200 Sobic004G257300 Sobic004G257300 Sobic010G101400--Sobic004G257300 Sobic001G321800 Sobic001G321800 Sobic010G101400--Sobic001G321800 Sobic004G172100 Sobic004G172100 Sobic006G242100--Sobic004G172100 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic002G270000 Sobic002G270000 Sobic001G063500--Sobic002G270000 Sobic002G128800 Sobic002G128800 Sobic001G063500--Sobic002G128800 Sobic009G026101 Sobic009G026101 Sobic001G063500--Sobic009G026101 Sobic001G409100 Sobic001G409100 Sobic001G063500--Sobic001G409100 Sobic002G075500 Sobic002G075500 Sobic001G063500--Sobic002G075500 Sobic004G007600 Sobic004G007600 Sobic001G063500--Sobic004G007600 Sobic002G252000 Sobic002G252000 Sobic001G063500--Sobic002G252000 Sobic001G133900 Sobic001G133900 Sobic001G063500--Sobic001G133900 Sobic006G278100 Sobic006G278100 Sobic001G063500--Sobic006G278100 Sobic006G081600--Sobic010G008600 Sobic006G081600--Sobic002G372800 Sobic009G073300 Sobic009G073300 Sobic006G081600--Sobic009G073300 Sobic006G081600--Sobic002G270000 Sobic006G081600--Sobic004G257300 Sobic001G017100 Sobic001G017100 Sobic006G081600--Sobic001G017100 Sobic006G081600--Sobic004G033000 Sobic004G212300 Sobic004G212300 Sobic006G081600--Sobic004G212300 Sobic006G081600--Sobic003G127100 Sobic004G033000--Sobic006G081600 Sobic004G033000--Sobic010G008600 Sobic004G033000--Sobic003G127100 Sobic002G124700 Sobic002G124700 Sobic004G033000--Sobic002G124700 Sobic003G129400 Sobic003G129400 Sobic004G033000--Sobic003G129400 Sobic004G285600 Sobic004G285600 Sobic004G033000--Sobic004G285600 Sobic004G033000--Sobic002G372800 Sobic009G102600 Sobic009G102600 Sobic004G033000--Sobic009G102600 Sobic004G288700 Sobic004G288700 Sobic004G033000--Sobic004G288700 Sobic001G294400--Sobic006G242100 Sobic001G294400--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic001G294400--Sobic009G102600
Octagon: transcription factors


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