Gene annotation
Transcriptome id Sobic.004G033000.1
Synonym Sb04g002850
Functional annotation glycosyltransferase, putative, expressed
UniProt C5XTX5
Pfam PF04577
Panther DB PTHR20961 PTHR20961:SF14
NCBI CDD KOG4698; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G18180 : Glycosyltransferase family 61 protein
RAP-DB (Rice) LOC_Os02g04250.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a041478 , Zm00025a026412 , Zm00025a035017 , Zm00025a050884 , Zm00025a023696 , Zm00025a042368 , Zm00025a018903 , Zm00025a018417
Brachypodium PNT65821 , KQJ92371 , KQJ93195
Barley HORVU6Hr1G076340.2 , HORVU6Hr1G076340.3 , HORVU6Hr1G076340.1 , HORVU6Hr1G076340.6 , HORVU6Hr1G076340.4 , HORVU6Hr1G076340.5 , HORVU5Hr1G053930.11 , HORVU5Hr1G053930.10 , HORVU0Hr1G020730.6 , HORVU0Hr1G020730.4 , HORVU0Hr1G020730.5 , HORVU0Hr1G020730.2 , HORVU5Hr1G053930.5 , HORVU5Hr1G053930.4 , HORVU5Hr1G053930.9 , HORVU1Hr1G004980.2 , HORVU1Hr1G004980.1 , HORVU0Hr1G020730.8 , HORVU0Hr1G020730.7 , HORVU0Hr1G020730.3 , HORVU0Hr1G020730.1 , HORVU5Hr1G053930.7 , HORVU5Hr1G053930.6 , HORVU5Hr1G053930.3 , HORVU5Hr1G053930.2 , HORVU5Hr1G053930.1 , HORVU5Hr1G053930.8 , HORVU7Hr1G048560.2 , HORVU7Hr1G048560.3 , HORVU7Hr1G048560.1
Wheat TraesCS6D02G090700 , TraesCS7A02G236300 , TraesCS7B02G134300 , TraesCS6D02G288800 , TraesCS7D02G236400 , TraesCS1A02G257300 , TraesCS6B02G339100 , TraesCS6A02G102100 , TraesCS7A02G411400 , TraesCS7B02G133900 , TraesCS7B02G133900 , TraesCS7B02G310700 , TraesCS7A02G235500 , TraesCS7D02G404500 , TraesCS1B02G267800 , TraesCS1B02G267800 , TraesCS1B02G267800 , TraesCS6A02G309400 , TraesCS1D02G256600 , TraesCS1D02G256600 , TraesCS6B02G130500 , TraesCS6B02G130500 , TraesCS7D02G235600 , TraesCS3D02G023000 , TraesCS3B02G021700 , TraesCS3D02G023000 , TraesCS3D02G023000
Populus -


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cDNA sequences
Sobic.004G033000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G081600 expressed protein -
2 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
3 Sobic.003G127100 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G124700 up-regulated by silicon application(PubMedID : 24879770)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
6 Sobic.004G285600 ethylene-responsive protein related, putative, expressed -
7 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
9 Sobic.004G288700 similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.004G273200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
11 Sobic.010G201388 - -
12 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
14 Sobic.001G230900 - K07910: Ras-related protein Rab-18
15 Sobic.010G030900 glycosyltransferase, putative, expressed -
16 Sobic.005G230000 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -
19 Sobic.003G056500 staphylococcal nuclease homologue, putative, expressed -
20 Sobic.007G223300 transcription factor BIM2, putative, expressed -


Gene co-expression network
sample Sobic004G033000 Sobic004G033000 Sobic006G081600 Sobic006G081600 Sobic004G033000--Sobic006G081600 Sobic010G008600 Sobic010G008600 Sobic004G033000--Sobic010G008600 Sobic003G127100 Sobic003G127100 Sobic004G033000--Sobic003G127100 Sobic002G124700 Sobic002G124700 Sobic004G033000--Sobic002G124700 Sobic003G129400 Sobic003G129400 Sobic004G033000--Sobic003G129400 Sobic004G285600 Sobic004G285600 Sobic004G033000--Sobic004G285600 Sobic002G372800 Sobic002G372800 Sobic004G033000--Sobic002G372800 Sobic009G102600 Sobic009G102600 Sobic004G033000--Sobic009G102600 Sobic004G288700 Sobic004G288700 Sobic004G033000--Sobic004G288700 Sobic006G081600--Sobic010G008600 Sobic006G081600--Sobic002G372800 Sobic009G073300 Sobic009G073300 Sobic006G081600--Sobic009G073300 Sobic002G270000 Sobic002G270000 Sobic006G081600--Sobic002G270000 Sobic004G257300 Sobic004G257300 Sobic006G081600--Sobic004G257300 Sobic001G017100 Sobic001G017100 Sobic006G081600--Sobic001G017100 Sobic006G081600--Sobic004G033000 Sobic004G212300 Sobic004G212300 Sobic006G081600--Sobic004G212300 Sobic006G081600--Sobic003G127100 Sobic010G008600--Sobic003G127100 Sobic010G101400 Sobic010G101400 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G030900 Sobic010G030900 Sobic010G008600--Sobic010G030900 Sobic009G194200 Sobic009G194200 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic001G061900 Sobic001G061900 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic010G008600--Sobic002G372800 Sobic003G127100--Sobic010G008600 Sobic003G127100--Sobic002G372800 Sobic008G168100 Sobic008G168100 Sobic003G127100--Sobic008G168100 Sobic003G127100--Sobic010G101400 Sobic006G242100 Sobic006G242100 Sobic003G127100--Sobic006G242100 Sobic001G063500 Sobic001G063500 Sobic003G127100--Sobic001G063500 Sobic003G127100--Sobic006G081600 Sobic003G127100--Sobic004G033000 Sobic001G294400 Sobic001G294400 Sobic003G127100--Sobic001G294400 Sobic002G124700--Sobic004G257300 Sobic006G176700 Sobic006G176700 Sobic002G124700--Sobic006G176700 Sobic003G305601 Sobic003G305601 Sobic002G124700--Sobic003G305601 Sobic002G124700--Sobic002G270000 Sobic001G217000 Sobic001G217000 Sobic002G124700--Sobic001G217000 Sobic002G124700--Sobic004G288700 Sobic009G195900 Sobic009G195900 Sobic002G124700--Sobic009G195900 Sobic001G084100 Sobic001G084100 Sobic002G124700--Sobic001G084100 Sobic003G108200 Sobic003G108200 Sobic002G124700--Sobic003G108200 Sobic003G342600 Sobic003G342600 Sobic003G129400--Sobic003G342600 Sobic010G071700 Sobic010G071700 Sobic003G129400--Sobic010G071700 Sobic003G129400--Sobic001G063600 Sobic001G379000 Sobic001G379000 Sobic003G129400--Sobic001G379000 Sobic007G180300 Sobic007G180300 Sobic003G129400--Sobic007G180300 Sobic009G030200 Sobic009G030200 Sobic003G129400--Sobic009G030200 Sobic005G231700 Sobic005G231700 Sobic003G129400--Sobic005G231700 Sobic002G185300 Sobic002G185300 Sobic003G129400--Sobic002G185300 Sobic001G403600 Sobic001G403600 Sobic003G129400--Sobic001G403600 Sobic001G532200 Sobic001G532200 Sobic004G285600--Sobic001G532200 Sobic009G027900 Sobic009G027900 Sobic004G285600--Sobic009G027900 Sobic009G248500 Sobic009G248500 Sobic004G285600--Sobic009G248500 Sobic004G285600--Sobic004G212300 Sobic010G052200 Sobic010G052200 Sobic004G285600--Sobic010G052200 Sobic001G464900 Sobic001G464900 Sobic004G285600--Sobic001G464900 Sobic001G173300 Sobic001G173300 Sobic004G285600--Sobic001G173300 Sobic004G285600--Sobic001G084100 Sobic001G516600 Sobic001G516600 Sobic004G285600--Sobic001G516600 Sobic007G009500 Sobic007G009500 Sobic002G372800--Sobic007G009500 Sobic002G372800--Sobic003G127100 Sobic001G108350 Sobic001G108350 Sobic002G372800--Sobic001G108350 Sobic004G257800 Sobic004G257800 Sobic002G372800--Sobic004G257800 Sobic005G110490 Sobic005G110490 Sobic002G372800--Sobic005G110490 Sobic002G372800--Sobic001G063600 Sobic002G325900 Sobic002G325900 Sobic002G372800--Sobic002G325900 Sobic002G372800--Sobic006G242100 Sobic002G372800--Sobic010G008600 Sobic010G069900 Sobic010G069900 Sobic009G102600--Sobic010G069900 Sobic004G172100 Sobic004G172100 Sobic009G102600--Sobic004G172100 Sobic009G102600--Sobic004G212300 Sobic002G040600 Sobic002G040600 Sobic009G102600--Sobic002G040600 Sobic009G102600--Sobic001G294400 Sobic010G192432 Sobic010G192432 Sobic009G102600--Sobic010G192432 Sobic010G192366 Sobic010G192366 Sobic009G102600--Sobic010G192366 Sobic003G095400 Sobic003G095400 Sobic009G102600--Sobic003G095400 Sobic009G102600--Sobic003G129400 Sobic004G288700--Sobic006G176700 Sobic003G373100 Sobic003G373100 Sobic004G288700--Sobic003G373100 Sobic004G222000 Sobic004G222000 Sobic004G288700--Sobic004G222000 Sobic004G288700--Sobic002G270000 Sobic004G288700--Sobic002G124700 Sobic004G288700--Sobic001G084100 Sobic009G002400 Sobic009G002400 Sobic004G288700--Sobic009G002400 Sobic004G288700--Sobic001G294400 Sobic004G288700--Sobic009G073300
Octagon: transcription factors


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