Gene annotation
Transcriptome id Sobic.005G230000.1
Synonym SCL14, Sb05g027780, ATGRAS2, GRAS2
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1B6PU88
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47890.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT62875
Barley HORVU5Hr1G020900.4 , HORVU5Hr1G020900.5 , HORVU5Hr1G020900.6 , HORVU5Hr1G020900.1 , HORVU5Hr1G020900.2 , HORVU5Hr1G020900.3 , HORVU4Hr1G027920.2 , HORVU4Hr1G027920.3 , HORVU4Hr1G027920.1 , HORVU4Hr1G027920.6 , HORVU4Hr1G027920.4 , HORVU4Hr1G027920.5
Wheat TraesCS4D02G136500 , TraesCS5D02G092000 , TraesCS5A02G080300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G230200 GRAS family transcription factor domain containing protein, expressed -
2 Sobic.004G285600 ethylene-responsive protein related, putative, expressed -
3 Sobic.004G033000 glycosyltransferase, putative, expressed -
4 Sobic.003G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
6 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
7 Sobic.004G159500 AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
9 Sobic.006G176700 similar to Aquaporin PIP1-3/PIP1-4(PubMedID : 29862293)@up-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
11 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
12 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
13 Sobic.010G046500 csAtPR5, putative, expressed -
14 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
15 Sobic.003G136200 Cupin domain containing protein, expressed -
16 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
17 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
18 Sobic.005G026600 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
19 Sobic.005G211400 cytochrome P450, putative, expressed -
20 Sobic.001G232700 - -


Gene co-expression network
sample Sobic005G230000 Sobic005G230000 Sobic005G230200 Sobic005G230200 Sobic005G230000--Sobic005G230200 Sobic004G285600 Sobic004G285600 Sobic005G230000--Sobic004G285600 Sobic004G033000 Sobic004G033000 Sobic005G230000--Sobic004G033000 Sobic003G016600 Sobic003G016600 Sobic005G230000--Sobic003G016600 Sobic004G212300 Sobic004G212300 Sobic005G230000--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic005G230000--Sobic010G069900 Sobic004G159500 Sobic004G159500 Sobic005G230000--Sobic004G159500 Sobic004G262500 Sobic004G262500 Sobic005G230000--Sobic004G262500 Sobic006G176700 Sobic006G176700 Sobic005G230000--Sobic006G176700 Sobic002G404100 Sobic002G404100 Sobic005G230200--Sobic002G404100 Sobic003G020200 Sobic003G020200 Sobic005G230200--Sobic003G020200 Sobic006G028400 Sobic006G028400 Sobic005G230200--Sobic006G028400 Sobic005G230200--Sobic004G262500 Sobic006G028500 Sobic006G028500 Sobic005G230200--Sobic006G028500 Sobic002G365550 Sobic002G365550 Sobic005G230200--Sobic002G365550 Sobic003G240400 Sobic003G240400 Sobic005G230200--Sobic003G240400 Sobic003G228700 Sobic003G228700 Sobic005G230200--Sobic003G228700 Sobic002G233200 Sobic002G233200 Sobic005G230200--Sobic002G233200 Sobic001G532200 Sobic001G532200 Sobic004G285600--Sobic001G532200 Sobic009G027900 Sobic009G027900 Sobic004G285600--Sobic009G027900 Sobic009G248500 Sobic009G248500 Sobic004G285600--Sobic009G248500 Sobic004G285600--Sobic004G212300 Sobic010G052200 Sobic010G052200 Sobic004G285600--Sobic010G052200 Sobic001G464900 Sobic001G464900 Sobic004G285600--Sobic001G464900 Sobic001G173300 Sobic001G173300 Sobic004G285600--Sobic001G173300 Sobic001G084100 Sobic001G084100 Sobic004G285600--Sobic001G084100 Sobic001G516600 Sobic001G516600 Sobic004G285600--Sobic001G516600 Sobic006G081600 Sobic006G081600 Sobic004G033000--Sobic006G081600 Sobic010G008600 Sobic010G008600 Sobic004G033000--Sobic010G008600 Sobic003G127100 Sobic003G127100 Sobic004G033000--Sobic003G127100 Sobic002G124700 Sobic002G124700 Sobic004G033000--Sobic002G124700 Sobic003G129400 Sobic003G129400 Sobic004G033000--Sobic003G129400 Sobic004G033000--Sobic004G285600 Sobic002G372800 Sobic002G372800 Sobic004G033000--Sobic002G372800 Sobic009G102600 Sobic009G102600 Sobic004G033000--Sobic009G102600 Sobic004G288700 Sobic004G288700 Sobic004G033000--Sobic004G288700 Sobic006G087900 Sobic006G087900 Sobic003G016600--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic003G016600--Sobic006G076201 Sobic006G191100 Sobic006G191100 Sobic003G016600--Sobic006G191100 Sobic002G325900 Sobic002G325900 Sobic003G016600--Sobic002G325900 Sobic003G016600--Sobic010G069900 Sobic003G294400 Sobic003G294400 Sobic003G016600--Sobic003G294400 Sobic003G019700 Sobic003G019700 Sobic003G016600--Sobic003G019700 Sobic001G012800 Sobic001G012800 Sobic003G016600--Sobic001G012800 Sobic002G362900 Sobic002G362900 Sobic003G016600--Sobic002G362900 Sobic004G212300--Sobic010G052200 Sobic004G212300--Sobic001G532200 Sobic003G119500 Sobic003G119500 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic004G212300--Sobic001G084100 Sobic004G212300--Sobic001G516600 Sobic006G156000 Sobic006G156000 Sobic004G212300--Sobic006G156000 Sobic002G040600 Sobic002G040600 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic003G227700 Sobic003G227700 Sobic010G069900--Sobic003G227700 Sobic010G071400 Sobic010G071400 Sobic010G069900--Sobic010G071400 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic001G006201 Sobic001G006201 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic010G053200 Sobic010G053200 Sobic004G159500--Sobic010G053200 Sobic001G414300 Sobic001G414300 Sobic004G159500--Sobic001G414300 Sobic008G184700 Sobic008G184700 Sobic004G159500--Sobic008G184700 Sobic003G143000 Sobic003G143000 Sobic004G159500--Sobic003G143000 Sobic002G391800 Sobic002G391800 Sobic004G159500--Sobic002G391800 Sobic001G232700 Sobic001G232700 Sobic004G159500--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic004G159500--Sobic007G054900 Sobic001G539300 Sobic001G539300 Sobic004G159500--Sobic001G539300 Sobic009G130100 Sobic009G130100 Sobic004G262500--Sobic009G130100 Sobic006G274933 Sobic006G274933 Sobic004G262500--Sobic006G274933 Sobic003G404600 Sobic003G404600 Sobic004G262500--Sobic003G404600 Sobic003G417100 Sobic003G417100 Sobic004G262500--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic004G262500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic004G262500--Sobic009G219200 Sobic004G024100 Sobic004G024100 Sobic004G262500--Sobic004G024100 Sobic004G042000 Sobic004G042000 Sobic004G262500--Sobic004G042000 Sobic006G197100 Sobic006G197100 Sobic004G262500--Sobic006G197100 Sobic006G176700--Sobic004G288700 Sobic004G222000 Sobic004G222000 Sobic006G176700--Sobic004G222000 Sobic006G176700--Sobic002G124700 Sobic003G305601 Sobic003G305601 Sobic006G176700--Sobic003G305601 Sobic001G505100 Sobic001G505100 Sobic006G176700--Sobic001G505100 Sobic009G215000 Sobic009G215000 Sobic006G176700--Sobic009G215000 Sobic006G176700--Sobic001G084100 Sobic002G270000 Sobic002G270000 Sobic006G176700--Sobic002G270000 Sobic004G334800 Sobic004G334800 Sobic006G176700--Sobic004G334800
Octagon: transcription factors


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