Gene annotation
Transcriptome id Sobic.005G230200.1
Synonym GRAS2, SCL14, ATGRAS2, Sb05g027783
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RK42
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47890.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029081 , Zm00025a029079 , Zm00025a011229
Brachypodium KQJ87052 , PNT62877
Barley -
Wheat TraesCS4D02G136500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G404100 annexin, putative, expressed -
2 Sobic.003G020200 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
4 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
5 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
6 Sobic.002G365550 - -
7 Sobic.003G240400 leaf senescence related protein, putative, expressed -
8 Sobic.003G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
9 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G006201 - -
11 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
12 Sobic.009G074500 expressed protein -
13 Sobic.002G365801 - -
14 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.002G216100 cytochrome P450, putative, expressed -
18 Sobic.004G306900 amino acid transporter, putative, expressed -
19 Sobic.010G148800 WRKY31, expressed -
20 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase


Gene co-expression network
sample Sobic005G230200 Sobic005G230200 Sobic002G404100 Sobic002G404100 Sobic005G230200--Sobic002G404100 Sobic003G020200 Sobic003G020200 Sobic005G230200--Sobic003G020200 Sobic006G028400 Sobic006G028400 Sobic005G230200--Sobic006G028400 Sobic004G262500 Sobic004G262500 Sobic005G230200--Sobic004G262500 Sobic006G028500 Sobic006G028500 Sobic005G230200--Sobic006G028500 Sobic002G365550 Sobic002G365550 Sobic005G230200--Sobic002G365550 Sobic003G240400 Sobic003G240400 Sobic005G230200--Sobic003G240400 Sobic003G228700 Sobic003G228700 Sobic005G230200--Sobic003G228700 Sobic002G233200 Sobic002G233200 Sobic005G230200--Sobic002G233200 Sobic002G404100--Sobic006G028500 Sobic002G216100 Sobic002G216100 Sobic002G404100--Sobic002G216100 Sobic010G148800 Sobic010G148800 Sobic002G404100--Sobic010G148800 Sobic002G404100--Sobic003G240400 Sobic001G360500 Sobic001G360500 Sobic002G404100--Sobic001G360500 Sobic005G065900 Sobic005G065900 Sobic002G404100--Sobic005G065900 Sobic004G348800 Sobic004G348800 Sobic002G404100--Sobic004G348800 Sobic004G322800 Sobic004G322800 Sobic002G404100--Sobic004G322800 Sobic010G082000 Sobic010G082000 Sobic002G404100--Sobic010G082000 Sobic003G319400 Sobic003G319400 Sobic003G020200--Sobic003G319400 Sobic003G020200--Sobic010G148800 Sobic004G306900 Sobic004G306900 Sobic003G020200--Sobic004G306900 Sobic006G003100 Sobic006G003100 Sobic003G020200--Sobic006G003100 Sobic001G438200 Sobic001G438200 Sobic003G020200--Sobic001G438200 Sobic006G174300 Sobic006G174300 Sobic003G020200--Sobic006G174300 Sobic006G079300 Sobic006G079300 Sobic003G020200--Sobic006G079300 Sobic010G152400 Sobic010G152400 Sobic003G020200--Sobic010G152400 Sobic010G031700 Sobic010G031700 Sobic003G020200--Sobic010G031700 Sobic006G183900 Sobic006G183900 Sobic006G028400--Sobic006G183900 Sobic003G203600 Sobic003G203600 Sobic006G028400--Sobic003G203600 Sobic007G170300 Sobic007G170300 Sobic006G028400--Sobic007G170300 Sobic007G109600 Sobic007G109600 Sobic006G028400--Sobic007G109600 Sobic007G178900 Sobic007G178900 Sobic006G028400--Sobic007G178900 Sobic002G185800 Sobic002G185800 Sobic006G028400--Sobic002G185800 Sobic002G365500 Sobic002G365500 Sobic006G028400--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic006G028400--Sobic004G071000 Sobic006G028400--Sobic002G365550 Sobic009G130100 Sobic009G130100 Sobic004G262500--Sobic009G130100 Sobic006G274933 Sobic006G274933 Sobic004G262500--Sobic006G274933 Sobic003G404600 Sobic003G404600 Sobic004G262500--Sobic003G404600 Sobic003G417100 Sobic003G417100 Sobic004G262500--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic004G262500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic004G262500--Sobic009G219200 Sobic004G024100 Sobic004G024100 Sobic004G262500--Sobic004G024100 Sobic004G042000 Sobic004G042000 Sobic004G262500--Sobic004G042000 Sobic006G197100 Sobic006G197100 Sobic004G262500--Sobic006G197100 Sobic006G028500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G028500--Sobic006G019700 Sobic004G110700 Sobic004G110700 Sobic006G028500--Sobic004G110700 Sobic001G229000 Sobic001G229000 Sobic006G028500--Sobic001G229000 Sobic006G028500--Sobic003G240400 Sobic006G028500--Sobic010G082000 Sobic004G322100 Sobic004G322100 Sobic006G028500--Sobic004G322100 Sobic006G028500--Sobic010G152400 Sobic003G000100 Sobic003G000100 Sobic006G028500--Sobic003G000100 Sobic002G365801 Sobic002G365801 Sobic002G365550--Sobic002G365801 Sobic002G365600 Sobic002G365600 Sobic002G365550--Sobic002G365600 Sobic002G365550--Sobic002G365500 Sobic002G365550--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365550--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365550--Sobic010G212500 Sobic010G096400 Sobic010G096400 Sobic002G365550--Sobic010G096400 Sobic002G368300 Sobic002G368300 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic003G240400--Sobic010G082000 Sobic003G215300 Sobic003G215300 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic003G240400--Sobic006G196400 Sobic007G090600 Sobic007G090600 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic003G322100 Sobic003G322100 Sobic003G228700--Sobic003G322100 Sobic003G228700--Sobic002G365550 Sobic007G015200 Sobic007G015200 Sobic003G228700--Sobic007G015200 Sobic005G177400 Sobic005G177400 Sobic003G228700--Sobic005G177400 Sobic007G073000 Sobic007G073000 Sobic003G228700--Sobic007G073000 Sobic001G379400 Sobic001G379400 Sobic003G228700--Sobic001G379400 Sobic001G455100 Sobic001G455100 Sobic003G228700--Sobic001G455100 Sobic003G228700--Sobic002G404100 Sobic003G228700--Sobic002G365801 Sobic004G106100 Sobic004G106100 Sobic002G233200--Sobic004G106100 Sobic002G233200--Sobic010G031700 Sobic002G233200--Sobic003G000100 Sobic002G233200--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic002G233200--Sobic007G086300 Sobic002G233200--Sobic003G240400 Sobic002G233200--Sobic010G152400 Sobic006G205700 Sobic006G205700 Sobic002G233200--Sobic006G205700 Sobic002G146000 Sobic002G146000 Sobic002G233200--Sobic002G146000
Octagon: transcription factors


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