Gene annotation
Transcriptome id Sobic.003G020200.1
Synonym Sb03g001840
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6Q0W9
Pfam -
Panther DB PTHR22835 PTHR22835:SF149
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28600 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11750.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G319400 receptor protein kinase, putative, expressed -
2 Sobic.010G148800 WRKY31, expressed -
3 Sobic.004G306900 amino acid transporter, putative, expressed -
4 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
5 Sobic.001G438200 expressed protein -
6 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
7 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G152400 glycosyltransferase, putative, expressed -
9 Sobic.010G031700 thaumatin, putative, expressed -
10 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
14 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
15 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
16 Sobic.001G238200 expansin precursor, putative, expressed -
17 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
18 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
19 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G020200 Sobic003G020200 Sobic003G319400 Sobic003G319400 Sobic003G020200--Sobic003G319400 Sobic010G148800 Sobic010G148800 Sobic003G020200--Sobic010G148800 Sobic004G306900 Sobic004G306900 Sobic003G020200--Sobic004G306900 Sobic006G003100 Sobic006G003100 Sobic003G020200--Sobic006G003100 Sobic001G438200 Sobic001G438200 Sobic003G020200--Sobic001G438200 Sobic006G174300 Sobic006G174300 Sobic003G020200--Sobic006G174300 Sobic006G079300 Sobic006G079300 Sobic003G020200--Sobic006G079300 Sobic010G152400 Sobic010G152400 Sobic003G020200--Sobic010G152400 Sobic010G031700 Sobic010G031700 Sobic003G020200--Sobic010G031700 Sobic006G106900 Sobic006G106900 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G064800 Sobic003G064800 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic005G065900 Sobic005G065900 Sobic010G148800--Sobic005G065900 Sobic004G322800 Sobic004G322800 Sobic010G148800--Sobic004G322800 Sobic006G256900 Sobic006G256900 Sobic010G148800--Sobic006G256900 Sobic005G066432 Sobic005G066432 Sobic010G148800--Sobic005G066432 Sobic009G199001 Sobic009G199001 Sobic010G148800--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic010G148800--Sobic002G404100 Sobic002G042200 Sobic002G042200 Sobic010G148800--Sobic002G042200 Sobic009G219200 Sobic009G219200 Sobic010G148800--Sobic009G219200 Sobic010G148800--Sobic006G079300 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic006G003100--Sobic003G000100 Sobic006G003100--Sobic010G152400 Sobic006G003100--Sobic010G031700 Sobic006G003100--Sobic004G106100 Sobic006G003100--Sobic007G086300 Sobic002G233200 Sobic002G233200 Sobic006G003100--Sobic002G233200 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic007G158800 Sobic007G158800 Sobic006G003100--Sobic007G158800 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic003G140700 Sobic003G140700 Sobic001G438200--Sobic003G140700 Sobic001G438200--Sobic003G319400 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic001G438200--Sobic004G322100 Sobic006G277700 Sobic006G277700 Sobic006G174300--Sobic006G277700 Sobic006G174300--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic006G174300--Sobic001G058300 Sobic003G053600 Sobic003G053600 Sobic006G174300--Sobic003G053600 Sobic006G174300--Sobic003G319400 Sobic003G353200 Sobic003G353200 Sobic006G174300--Sobic003G353200 Sobic006G174300--Sobic010G031700 Sobic001G379400 Sobic001G379400 Sobic006G174300--Sobic001G379400 Sobic002G377700 Sobic002G377700 Sobic006G174300--Sobic002G377700 Sobic006G079300--Sobic001G438200 Sobic001G242100 Sobic001G242100 Sobic006G079300--Sobic001G242100 Sobic006G079300--Sobic009G219200 Sobic005G160700 Sobic005G160700 Sobic006G079300--Sobic005G160700 Sobic001G229000 Sobic001G229000 Sobic006G079300--Sobic001G229000 Sobic006G079300--Sobic001G379400 Sobic009G065800 Sobic009G065800 Sobic006G079300--Sobic009G065800 Sobic006G079300--Sobic004G322800 Sobic006G079300--Sobic010G148800 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic003G240400 Sobic003G240400 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic010G152400--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic010G152400--Sobic010G082000 Sobic010G152400--Sobic006G003100 Sobic010G152400--Sobic004G106100 Sobic010G152400--Sobic006G019700 Sobic003G053200 Sobic003G053200 Sobic010G031700--Sobic003G053200 Sobic007G037600 Sobic007G037600 Sobic010G031700--Sobic007G037600 Sobic003G441800 Sobic003G441800 Sobic010G031700--Sobic003G441800 Sobic010G031700--Sobic004G106100 Sobic004G029400 Sobic004G029400 Sobic010G031700--Sobic004G029400 Sobic010G031700--Sobic006G003100 Sobic006G205700 Sobic006G205700 Sobic010G031700--Sobic006G205700 Sobic010G031700--Sobic002G233200 Sobic010G031700--Sobic003G353200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.