Gene annotation
Transcriptome id Sobic.003G016600.1
Synonym Sb03g001650
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XKF8
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11650.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a022892
Brachypodium PNT70157 , PNT70158 , PNT70160 , KQK03301 , KQK03300
Barley HORVU3Hr1G058610.5 , HORVU3Hr1G058610.4 , HORVU3Hr1G058610.7 , HORVU3Hr1G058610.1 , HORVU3Hr1G058610.2 , HORVU3Hr1G058610.9 , HORVU3Hr1G058610.8 , HORVU3Hr1G058610.10 , HORVU3Hr1G028060.4 , HORVU3Hr1G028060.3 , HORVU3Hr1G028060.2 , HORVU3Hr1G028020.3 , HORVU3Hr1G028020.2 , HORVU3Hr1G028020.5 , HORVU3Hr1G028020.6 , HORVU3Hr1G028020.8 , HORVU3Hr1G028020.1 , HORVU3Hr1G028020.4 , HORVU3Hr1G028020.7 , HORVU0Hr1G006800.1 , HORVU0Hr1G006800.2
Wheat TraesCS3B02G163700 , TraesCS3B02G163700 , TraesCS7B02G233800 , TraesCS7A02G348900 , TraesCS3A02G235500 , TraesCS3D02G235600 , TraesCS3D02G146000 , TraesCS7A02G348600 , TraesCS3D02G146200 , TraesCS3A02G140900 , TraesCS3A02G141100 , TraesCS7D02G329700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.006G076201 - -
3 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.002G325900 aspartic proteinase nepenthesin precursor, putative, expressed -
5 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
6 Sobic.003G294400 VQ domain containing protein, putative, expressed -
7 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
9 Sobic.002G362900 IBS1, putative, expressed -
10 Sobic.005G211400 cytochrome P450, putative, expressed -
11 Sobic.001G108350 - -
12 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
14 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
15 Sobic.010G192432 - K14431: transcription factor TGA
16 Sobic.007G137300 myb-like DNA-binding domain containing protein, expressed -
17 Sobic.004G078800 transcription factor, putative, expressed K14431: transcription factor TGA
18 Sobic.001G006201 - -
19 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
20 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase


Gene co-expression network
sample Sobic003G016600 Sobic003G016600 Sobic006G087900 Sobic006G087900 Sobic003G016600--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic003G016600--Sobic006G076201 Sobic006G191100 Sobic006G191100 Sobic003G016600--Sobic006G191100 Sobic002G325900 Sobic002G325900 Sobic003G016600--Sobic002G325900 Sobic010G069900 Sobic010G069900 Sobic003G016600--Sobic010G069900 Sobic003G294400 Sobic003G294400 Sobic003G016600--Sobic003G294400 Sobic003G019700 Sobic003G019700 Sobic003G016600--Sobic003G019700 Sobic001G012800 Sobic001G012800 Sobic003G016600--Sobic001G012800 Sobic002G362900 Sobic002G362900 Sobic003G016600--Sobic002G362900 Sobic005G231700 Sobic005G231700 Sobic006G087900--Sobic005G231700 Sobic006G087900--Sobic002G362900 Sobic003G296700 Sobic003G296700 Sobic006G087900--Sobic003G296700 Sobic001G063600 Sobic001G063600 Sobic006G087900--Sobic001G063600 Sobic006G087900--Sobic006G076201 Sobic010G080400 Sobic010G080400 Sobic006G087900--Sobic010G080400 Sobic006G087900--Sobic002G325900 Sobic001G051800 Sobic001G051800 Sobic006G087900--Sobic001G051800 Sobic009G220200 Sobic009G220200 Sobic006G087900--Sobic009G220200 Sobic006G076201--Sobic006G087900 Sobic004G145200 Sobic004G145200 Sobic006G076201--Sobic004G145200 Sobic006G076201--Sobic002G325900 Sobic010G236500 Sobic010G236500 Sobic006G076201--Sobic010G236500 Sobic005G195600 Sobic005G195600 Sobic006G076201--Sobic005G195600 Sobic006G076201--Sobic006G191100 Sobic006G076201--Sobic003G016600 Sobic002G242500 Sobic002G242500 Sobic006G076201--Sobic002G242500 Sobic006G076201--Sobic002G362900 Sobic006G191100--Sobic005G195600 Sobic006G191100--Sobic006G087900 Sobic006G191100--Sobic006G076201 Sobic006G191100--Sobic002G362900 Sobic006G191100--Sobic010G069900 Sobic006G191100--Sobic003G016600 Sobic003G227700 Sobic003G227700 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic007G221100 Sobic007G221100 Sobic006G191100--Sobic007G221100 Sobic002G325900--Sobic005G231700 Sobic002G325900--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic002G325900--Sobic003G278700 Sobic002G325900--Sobic001G063600 Sobic002G325900--Sobic006G076201 Sobic002G325900--Sobic010G080400 Sobic002G325900--Sobic003G016600 Sobic009G002400 Sobic009G002400 Sobic002G325900--Sobic009G002400 Sobic002G372800 Sobic002G372800 Sobic002G325900--Sobic002G372800 Sobic010G069900--Sobic003G227700 Sobic010G071400 Sobic010G071400 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic001G006201 Sobic001G006201 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic004G259500 Sobic004G259500 Sobic003G294400--Sobic004G259500 Sobic003G294400--Sobic002G362900 Sobic005G211400 Sobic005G211400 Sobic003G294400--Sobic005G211400 Sobic003G294400--Sobic004G145200 Sobic003G294400--Sobic001G012800 Sobic007G188100 Sobic007G188100 Sobic003G294400--Sobic007G188100 Sobic003G294400--Sobic010G236500 Sobic003G294400--Sobic003G296700 Sobic003G294400--Sobic009G220200 Sobic003G019800 Sobic003G019800 Sobic003G019700--Sobic003G019800 Sobic003G019700--Sobic003G016600 Sobic005G092000 Sobic005G092000 Sobic003G019700--Sobic005G092000 Sobic005G110490 Sobic005G110490 Sobic003G019700--Sobic005G110490 Sobic009G257700 Sobic009G257700 Sobic003G019700--Sobic009G257700 Sobic010G035900 Sobic010G035900 Sobic003G019700--Sobic010G035900 Sobic003G019700--Sobic006G076201 Sobic003G019700--Sobic002G372800 Sobic003G019700--Sobic010G069900 Sobic002G118600 Sobic002G118600 Sobic001G012800--Sobic002G118600 Sobic001G012800--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic001G012800--Sobic009G241700 Sobic001G012800--Sobic009G220200 Sobic001G012800--Sobic007G188100 Sobic001G012800--Sobic004G259500 Sobic001G012800--Sobic003G294400 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic002G362900--Sobic007G188100 Sobic002G362900--Sobic006G087900 Sobic002G362900--Sobic009G220200 Sobic009G208800 Sobic009G208800 Sobic002G362900--Sobic009G208800 Sobic002G362900--Sobic004G145200 Sobic002G362900--Sobic005G231700 Sobic008G016900 Sobic008G016900 Sobic002G362900--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.