Gene annotation
Transcriptome id Sobic.004G078800.1,Sobic.004G078800.2
Synonym bZIP65, TGA10, Sb04g006500
Functional annotation transcription factor, putative, expressed
UniProt A0A194YNC1 , A0A1Z5RLE7
Pfam PF00170 PF14144
Panther DB PTHR22952 PTHR22952:SF128
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G06839 : bZIP transcription factor family protein
RAP-DB (Rice) LOC_Os09g10840.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a019651 , Zm00025a051551
Brachypodium KQJ93844 , KQJ93843
Barley -
Wheat TraesCS6B02G193200 , TraesCS6B02G193200 , TraesCS6D02G154400 , TraesCS6D02G154400 , TraesCS6D02G154400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G192432 - K14431: transcription factor TGA
2 Sobic.010G192366 - -
3 Sobic.001G483600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -
4 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
5 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
6 Sobic.010G071400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
8 Sobic.004G177000 glycosyl transferase, putative, expressed -
9 Sobic.002G318200 expressed protein -
10 Sobic.001G307700 expressed protein -
11 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
12 Sobic.006G076201 - -
13 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
14 Sobic.001G235800 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
16 Sobic.005G110490 - -
17 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.006G135300 expressed protein -
20 Sobic.001G006201 - -


Gene co-expression network
sample Sobic004G078800 Sobic004G078800 Sobic010G192432 Sobic010G192432 Sobic004G078800--Sobic010G192432 Sobic010G192366 Sobic010G192366 Sobic004G078800--Sobic010G192366 Sobic001G483600 Sobic001G483600 Sobic004G078800--Sobic001G483600 Sobic010G069900 Sobic010G069900 Sobic004G078800--Sobic010G069900 Sobic003G095400 Sobic003G095400 Sobic004G078800--Sobic003G095400 Sobic010G071400 Sobic010G071400 Sobic004G078800--Sobic010G071400 Sobic003G227700 Sobic003G227700 Sobic004G078800--Sobic003G227700 Sobic004G177000 Sobic004G177000 Sobic004G078800--Sobic004G177000 Sobic002G318200 Sobic002G318200 Sobic004G078800--Sobic002G318200 Sobic010G192432--Sobic010G192366 Sobic010G192432--Sobic004G078800 Sobic010G192432--Sobic003G227700 Sobic010G192432--Sobic001G483600 Sobic001G067100 Sobic001G067100 Sobic010G192432--Sobic001G067100 Sobic006G135300 Sobic006G135300 Sobic010G192432--Sobic006G135300 Sobic010G097200 Sobic010G097200 Sobic010G192432--Sobic010G097200 Sobic010G192432--Sobic010G071400 Sobic007G100700 Sobic007G100700 Sobic010G192432--Sobic007G100700 Sobic010G192366--Sobic010G192432 Sobic010G192366--Sobic010G097200 Sobic010G192366--Sobic001G483600 Sobic004G119800 Sobic004G119800 Sobic010G192366--Sobic004G119800 Sobic008G037900 Sobic008G037900 Sobic010G192366--Sobic008G037900 Sobic006G196400 Sobic006G196400 Sobic010G192366--Sobic006G196400 Sobic005G080600 Sobic005G080600 Sobic010G192366--Sobic005G080600 Sobic010G192366--Sobic006G135300 Sobic010G192366--Sobic007G100700 Sobic001G483600--Sobic010G192366 Sobic001G483600--Sobic010G192432 Sobic001G483600--Sobic003G227700 Sobic001G483600--Sobic010G097200 Sobic001G483600--Sobic010G069900 Sobic001G483600--Sobic004G078800 Sobic001G006201 Sobic001G006201 Sobic001G483600--Sobic001G006201 Sobic001G360700 Sobic001G360700 Sobic001G483600--Sobic001G360700 Sobic002G203900 Sobic002G203900 Sobic001G483600--Sobic002G203900 Sobic010G069900--Sobic003G227700 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G069900--Sobic010G192432 Sobic010G069900--Sobic001G006201 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic010G069900--Sobic004G078800 Sobic004G172100 Sobic004G172100 Sobic003G095400--Sobic004G172100 Sobic003G095400--Sobic004G078800 Sobic006G087900 Sobic006G087900 Sobic003G095400--Sobic006G087900 Sobic003G095400--Sobic010G069900 Sobic010G236500 Sobic010G236500 Sobic003G095400--Sobic010G236500 Sobic006G242100 Sobic006G242100 Sobic003G095400--Sobic006G242100 Sobic001G294400 Sobic001G294400 Sobic003G095400--Sobic001G294400 Sobic006G076201 Sobic006G076201 Sobic003G095400--Sobic006G076201 Sobic003G095400--Sobic009G102600 Sobic006G274933 Sobic006G274933 Sobic010G071400--Sobic006G274933 Sobic010G071400--Sobic003G227700 Sobic002G183700 Sobic002G183700 Sobic010G071400--Sobic002G183700 Sobic003G119500 Sobic003G119500 Sobic010G071400--Sobic003G119500 Sobic004G029100 Sobic004G029100 Sobic010G071400--Sobic004G029100 Sobic004G322100 Sobic004G322100 Sobic010G071400--Sobic004G322100 Sobic003G140700 Sobic003G140700 Sobic010G071400--Sobic003G140700 Sobic008G019800 Sobic008G019800 Sobic010G071400--Sobic008G019800 Sobic006G256900 Sobic006G256900 Sobic010G071400--Sobic006G256900 Sobic003G227700--Sobic010G069900 Sobic003G257400 Sobic003G257400 Sobic003G227700--Sobic003G257400 Sobic003G227700--Sobic010G071400 Sobic006G003100 Sobic006G003100 Sobic003G227700--Sobic006G003100 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic002G146000 Sobic002G146000 Sobic004G177000--Sobic002G146000 Sobic006G092700 Sobic006G092700 Sobic004G177000--Sobic006G092700 Sobic004G177000--Sobic006G135300 Sobic007G073000 Sobic007G073000 Sobic004G177000--Sobic007G073000 Sobic008G164450 Sobic008G164450 Sobic004G177000--Sobic008G164450 Sobic010G113100 Sobic010G113100 Sobic004G177000--Sobic010G113100 Sobic010G001300 Sobic010G001300 Sobic004G177000--Sobic010G001300 Sobic010G028100 Sobic010G028100 Sobic004G177000--Sobic010G028100 Sobic006G003600 Sobic006G003600 Sobic004G177000--Sobic006G003600 Sobic001G360500 Sobic001G360500 Sobic002G318200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic002G318200--Sobic003G203600 Sobic006G183900 Sobic006G183900 Sobic002G318200--Sobic006G183900 Sobic002G216100 Sobic002G216100 Sobic002G318200--Sobic002G216100 Sobic005G046700 Sobic005G046700 Sobic002G318200--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic002G318200--Sobic007G165400 Sobic006G229100 Sobic006G229100 Sobic002G318200--Sobic006G229100 Sobic002G404100 Sobic002G404100 Sobic002G318200--Sobic002G404100 Sobic004G139300 Sobic004G139300 Sobic002G318200--Sobic004G139300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.