Gene annotation
Transcriptome id Sobic.004G172100.1
Synonym Sb04g022300
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt C5XU54
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF229
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G01540 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g34430.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a011391 , Zm00025a053493 , Zm00025a020608
Brachypodium KQJ82636 , KQJ99818
Barley HORVU2Hr1G027940.6 , HORVU2Hr1G027940.5 , HORVU2Hr1G027940.2 , HORVU2Hr1G027940.1 , HORVU2Hr1G027940.8 , HORVU2Hr1G075030.2 , HORVU2Hr1G075030.11 , HORVU2Hr1G075030.10 , HORVU2Hr1G075030.13 , HORVU2Hr1G075030.12 , HORVU2Hr1G075030.14 , HORVU2Hr1G075030.5 , HORVU2Hr1G075030.4 , HORVU2Hr1G075030.7 , HORVU2Hr1G075030.6 , HORVU2Hr1G075030.1 , HORVU2Hr1G075030.3 , HORVU2Hr1G075030.9 , HORVU2Hr1G075030.8 , HORVU2Hr1G027940.12
Wheat TraesCS3B02G280500 , TraesCS2B02G318400 , TraesCS3A02G251000 , TraesCS3A02G251000 , TraesCS3A02G251000 , TraesCS3A02G251000 , TraesCS3A02G251000 , TraesCS3A02G251000 , TraesCS2A02G154300 , TraesCS2A02G154300 , TraesCS2A02G302500 , TraesCS2B02G179500 , TraesCS2D02G301200 , TraesCS2D02G159800 , TraesCS2D02G159800 , TraesCS3D02G251400 , TraesCS3D02G251400 , TraesCS3D02G251400 , TraesCS3D02G251400 , TraesCS3D02G251400 , TraesCS3D02G251400 , TraesCS3D02G251400
Populus PNT26270 , PNT26269


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cDNA sequences
Sobic.004G172100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
3 Sobic.009G030200 homeobox protein knotted-1-like 6, putative, expressed -
4 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
6 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
7 Sobic.009G099000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
9 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.007G137300 myb-like DNA-binding domain containing protein, expressed -
11 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
12 Sobic.005G092000 resistance protein, putative, expressed -
13 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
14 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
15 Sobic.002G325900 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
17 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.010G035900 expressed protein -
19 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
20 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic004G172100 Sobic004G172100 Sobic006G242100 Sobic006G242100 Sobic004G172100--Sobic006G242100 Sobic003G095400 Sobic003G095400 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic006G087900 Sobic006G087900 Sobic004G172100--Sobic006G087900 Sobic009G102600 Sobic009G102600 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic001G294400 Sobic001G294400 Sobic004G172100--Sobic001G294400 Sobic006G242100--Sobic004G172100 Sobic006G242100--Sobic001G294400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic003G095400--Sobic004G172100 Sobic004G078800 Sobic004G078800 Sobic003G095400--Sobic004G078800 Sobic003G095400--Sobic006G087900 Sobic010G069900 Sobic010G069900 Sobic003G095400--Sobic010G069900 Sobic010G236500 Sobic010G236500 Sobic003G095400--Sobic010G236500 Sobic003G095400--Sobic006G242100 Sobic003G095400--Sobic001G294400 Sobic006G076201 Sobic006G076201 Sobic003G095400--Sobic006G076201 Sobic003G095400--Sobic009G102600 Sobic001G050800 Sobic001G050800 Sobic009G030200--Sobic001G050800 Sobic001G157400 Sobic001G157400 Sobic009G030200--Sobic001G157400 Sobic009G030200--Sobic003G278700 Sobic010G071700 Sobic010G071700 Sobic009G030200--Sobic010G071700 Sobic005G231700 Sobic005G231700 Sobic009G030200--Sobic005G231700 Sobic003G227600 Sobic003G227600 Sobic009G030200--Sobic003G227600 Sobic003G342600 Sobic003G342600 Sobic009G030200--Sobic003G342600 Sobic009G159900 Sobic009G159900 Sobic009G030200--Sobic009G159900 Sobic006G032200 Sobic006G032200 Sobic009G030200--Sobic006G032200 Sobic006G087900--Sobic005G231700 Sobic002G362900 Sobic002G362900 Sobic006G087900--Sobic002G362900 Sobic003G296700 Sobic003G296700 Sobic006G087900--Sobic003G296700 Sobic001G063600 Sobic001G063600 Sobic006G087900--Sobic001G063600 Sobic006G087900--Sobic006G076201 Sobic010G080400 Sobic010G080400 Sobic006G087900--Sobic010G080400 Sobic002G325900 Sobic002G325900 Sobic006G087900--Sobic002G325900 Sobic001G051800 Sobic001G051800 Sobic006G087900--Sobic001G051800 Sobic006G087900--Sobic009G220200 Sobic009G102600--Sobic010G069900 Sobic009G102600--Sobic004G172100 Sobic004G212300 Sobic004G212300 Sobic009G102600--Sobic004G212300 Sobic002G040600 Sobic002G040600 Sobic009G102600--Sobic002G040600 Sobic009G102600--Sobic001G294400 Sobic010G192432 Sobic010G192432 Sobic009G102600--Sobic010G192432 Sobic010G192366 Sobic010G192366 Sobic009G102600--Sobic010G192366 Sobic009G102600--Sobic003G095400 Sobic003G129400 Sobic003G129400 Sobic009G102600--Sobic003G129400 Sobic003G278700--Sobic009G099000 Sobic003G278700--Sobic001G157400 Sobic001G460300 Sobic001G460300 Sobic003G278700--Sobic001G460300 Sobic003G278700--Sobic001G050800 Sobic003G278700--Sobic005G231700 Sobic003G278700--Sobic009G030200 Sobic010G272101 Sobic010G272101 Sobic003G278700--Sobic010G272101 Sobic003G278700--Sobic001G063600 Sobic003G278700--Sobic003G227600 Sobic009G099000--Sobic003G278700 Sobic009G099000--Sobic001G157400 Sobic006G026400 Sobic006G026400 Sobic009G099000--Sobic006G026400 Sobic009G099000--Sobic001G050800 Sobic009G099000--Sobic001G460300 Sobic008G040900 Sobic008G040900 Sobic009G099000--Sobic008G040900 Sobic006G194600 Sobic006G194600 Sobic009G099000--Sobic006G194600 Sobic009G099000--Sobic005G231700 Sobic009G099000--Sobic004G172100 Sobic006G156600 Sobic006G156600 Sobic004G257800--Sobic006G156600 Sobic004G257800--Sobic004G172100 Sobic002G075500 Sobic002G075500 Sobic004G257800--Sobic002G075500 Sobic001G108350 Sobic001G108350 Sobic004G257800--Sobic001G108350 Sobic004G257800--Sobic002G372800 Sobic007G180900 Sobic007G180900 Sobic004G257800--Sobic007G180900 Sobic007G009500 Sobic007G009500 Sobic004G257800--Sobic007G009500 Sobic004G257800--Sobic009G099000 Sobic005G110490 Sobic005G110490 Sobic004G257800--Sobic005G110490 Sobic001G294400--Sobic006G242100 Sobic001G294400--Sobic004G212300 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic001G294400--Sobic009G102600
Octagon: transcription factors


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