Gene annotation
Transcriptome id Sobic.007G137300.1,Sobic.007G137300.3,Sobic.007G137300.2
Synonym Sb07g021290
Functional annotation myb-like DNA-binding domain containing protein, expressed
UniProt C5YL87
Pfam PF00249 PF14379
Panther DB PTHR31499 PTHR31499:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04030 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os08g33750.1 : myb-like DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005926 , Zm00025a031145
Brachypodium KQJ98403 , PNT68163 , PNT68162 , PNT68161 , PNT68160 , PNT68165 , PNT68164 , PNT68159
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G137300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
2 Sobic.001G108350 - -
3 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
4 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.001G294400 CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
7 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
8 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
9 Sobic.002G325900 aspartic proteinase nepenthesin precursor, putative, expressed -
10 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
11 Sobic.002G362900 IBS1, putative, expressed -
12 Sobic.003G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
14 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
15 Sobic.010G192432 - K14431: transcription factor TGA
16 Sobic.005G110490 - -
17 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
18 Sobic.010G192366 - -
19 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
20 Sobic.006G075600 WD-40 repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic007G137300 Sobic007G137300 Sobic004G172100 Sobic004G172100 Sobic007G137300--Sobic004G172100 Sobic001G108350 Sobic001G108350 Sobic007G137300--Sobic001G108350 Sobic006G191100 Sobic006G191100 Sobic007G137300--Sobic006G191100 Sobic006G087900 Sobic006G087900 Sobic007G137300--Sobic006G087900 Sobic002G372800 Sobic002G372800 Sobic007G137300--Sobic002G372800 Sobic001G294400 Sobic001G294400 Sobic007G137300--Sobic001G294400 Sobic006G242100 Sobic006G242100 Sobic007G137300--Sobic006G242100 Sobic007G009500 Sobic007G009500 Sobic007G137300--Sobic007G009500 Sobic002G325900 Sobic002G325900 Sobic007G137300--Sobic002G325900 Sobic004G172100--Sobic006G242100 Sobic003G095400 Sobic003G095400 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic004G172100--Sobic006G087900 Sobic009G102600 Sobic009G102600 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic004G172100--Sobic001G294400 Sobic001G108350--Sobic002G372800 Sobic001G108350--Sobic004G257800 Sobic001G108350--Sobic007G137300 Sobic006G156600 Sobic006G156600 Sobic001G108350--Sobic006G156600 Sobic003G016600 Sobic003G016600 Sobic001G108350--Sobic003G016600 Sobic005G110490 Sobic005G110490 Sobic001G108350--Sobic005G110490 Sobic001G108350--Sobic007G009500 Sobic001G080300 Sobic001G080300 Sobic001G108350--Sobic001G080300 Sobic001G108350--Sobic006G087900 Sobic005G195600 Sobic005G195600 Sobic006G191100--Sobic005G195600 Sobic006G191100--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic006G191100--Sobic006G076201 Sobic002G362900 Sobic002G362900 Sobic006G191100--Sobic002G362900 Sobic010G069900 Sobic010G069900 Sobic006G191100--Sobic010G069900 Sobic006G191100--Sobic003G016600 Sobic003G227700 Sobic003G227700 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic007G221100 Sobic007G221100 Sobic006G191100--Sobic007G221100 Sobic005G231700 Sobic005G231700 Sobic006G087900--Sobic005G231700 Sobic006G087900--Sobic002G362900 Sobic003G296700 Sobic003G296700 Sobic006G087900--Sobic003G296700 Sobic001G063600 Sobic001G063600 Sobic006G087900--Sobic001G063600 Sobic006G087900--Sobic006G076201 Sobic010G080400 Sobic010G080400 Sobic006G087900--Sobic010G080400 Sobic006G087900--Sobic002G325900 Sobic001G051800 Sobic001G051800 Sobic006G087900--Sobic001G051800 Sobic009G220200 Sobic009G220200 Sobic006G087900--Sobic009G220200 Sobic002G372800--Sobic007G009500 Sobic003G127100 Sobic003G127100 Sobic002G372800--Sobic003G127100 Sobic002G372800--Sobic001G108350 Sobic002G372800--Sobic004G257800 Sobic002G372800--Sobic005G110490 Sobic002G372800--Sobic001G063600 Sobic002G372800--Sobic002G325900 Sobic002G372800--Sobic006G242100 Sobic010G008600 Sobic010G008600 Sobic002G372800--Sobic010G008600 Sobic001G294400--Sobic006G242100 Sobic004G212300 Sobic004G212300 Sobic001G294400--Sobic004G212300 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic001G294400--Sobic009G102600 Sobic006G242100--Sobic004G172100 Sobic006G242100--Sobic001G294400 Sobic006G242100--Sobic003G095400 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic006G242100--Sobic009G220200 Sobic003G045900 Sobic003G045900 Sobic007G009500--Sobic003G045900 Sobic007G009500--Sobic005G110490 Sobic001G072600 Sobic001G072600 Sobic007G009500--Sobic001G072600 Sobic001G360700 Sobic001G360700 Sobic007G009500--Sobic001G360700 Sobic007G009500--Sobic006G156600 Sobic004G232900 Sobic004G232900 Sobic007G009500--Sobic004G232900 Sobic007G009500--Sobic002G372800 Sobic004G339800 Sobic004G339800 Sobic007G009500--Sobic004G339800 Sobic001G133900 Sobic001G133900 Sobic007G009500--Sobic001G133900 Sobic002G325900--Sobic005G231700 Sobic002G325900--Sobic006G087900 Sobic002G325900--Sobic003G278700 Sobic002G325900--Sobic001G063600 Sobic002G325900--Sobic006G076201 Sobic002G325900--Sobic010G080400 Sobic002G325900--Sobic003G016600 Sobic009G002400 Sobic009G002400 Sobic002G325900--Sobic009G002400 Sobic002G325900--Sobic002G372800
Octagon: transcription factors


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