Gene annotation
Transcriptome id Sobic.005G110490.1
Synonym -
Functional annotation -
UniProt A0A109NDS5 , C6JRL1
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF152
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07340 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os11g25560.1 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a032463 , Zm00025a021724 , Zm00025a005206 , Zm00025a029703 , Zm00025a015624
Brachypodium -
Barley -
Wheat TraesCS7A02G256200 , TraesCS7B02G152800 , TraesCS7B02G152800 , TraesCS3D02G417300 , TraesCS3D02G417300 , TraesCS3D02G417300 , TraesCS7D02G257000 , TraesCS7A02G256200 , TraesCS7A02G256200 , TraesCS3B02G457400 , TraesCS7D02G257000 , TraesCS7D02G257000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.001G006201 - -
3 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G115300 expressed protein -
5 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.010G192366 - -
7 Sobic.007G167400 gibberellin 20 oxidase 2, putative, expressed -
8 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
9 Sobic.002G318200 expressed protein -
10 Sobic.010G192432 - K14431: transcription factor TGA
11 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
12 Sobic.007G090472 - -
13 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
14 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G287450 - -
16 Sobic.006G183900 cytochrome P450, putative, expressed -
17 Sobic.001G506600 exostosin family domain containing protein, expressed -
18 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
19 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
20 Sobic.006G196400 U-box, putative, expressed -


Gene co-expression network
sample Sobic005G110490 Sobic005G110490 Sobic007G009500 Sobic007G009500 Sobic005G110490--Sobic007G009500 Sobic001G006201 Sobic001G006201 Sobic005G110490--Sobic001G006201 Sobic004G248500 Sobic004G248500 Sobic005G110490--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic005G110490--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic005G110490--Sobic001G503000 Sobic010G192366 Sobic010G192366 Sobic005G110490--Sobic010G192366 Sobic007G167400 Sobic007G167400 Sobic005G110490--Sobic007G167400 Sobic004G312200 Sobic004G312200 Sobic005G110490--Sobic004G312200 Sobic002G318200 Sobic002G318200 Sobic005G110490--Sobic002G318200 Sobic003G045900 Sobic003G045900 Sobic007G009500--Sobic003G045900 Sobic007G009500--Sobic005G110490 Sobic001G072600 Sobic001G072600 Sobic007G009500--Sobic001G072600 Sobic001G360700 Sobic001G360700 Sobic007G009500--Sobic001G360700 Sobic006G156600 Sobic006G156600 Sobic007G009500--Sobic006G156600 Sobic004G232900 Sobic004G232900 Sobic007G009500--Sobic004G232900 Sobic002G372800 Sobic002G372800 Sobic007G009500--Sobic002G372800 Sobic004G339800 Sobic004G339800 Sobic007G009500--Sobic004G339800 Sobic001G133900 Sobic001G133900 Sobic007G009500--Sobic001G133900 Sobic003G227700 Sobic003G227700 Sobic001G006201--Sobic003G227700 Sobic003G257400 Sobic003G257400 Sobic001G006201--Sobic003G257400 Sobic003G064800 Sobic003G064800 Sobic001G006201--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic001G006201--Sobic004G306900 Sobic001G006201--Sobic010G192366 Sobic001G238000 Sobic001G238000 Sobic001G006201--Sobic001G238000 Sobic010G071400 Sobic010G071400 Sobic001G006201--Sobic010G071400 Sobic010G097200 Sobic010G097200 Sobic001G006201--Sobic010G097200 Sobic001G421000 Sobic001G421000 Sobic001G006201--Sobic001G421000 Sobic004G248500--Sobic005G115300 Sobic004G248500--Sobic001G503000 Sobic001G464300 Sobic001G464300 Sobic004G248500--Sobic001G464300 Sobic007G109600 Sobic007G109600 Sobic004G248500--Sobic007G109600 Sobic004G248500--Sobic004G312200 Sobic001G348800 Sobic001G348800 Sobic004G248500--Sobic001G348800 Sobic006G183900 Sobic006G183900 Sobic004G248500--Sobic006G183900 Sobic005G104200 Sobic005G104200 Sobic004G248500--Sobic005G104200 Sobic001G263300 Sobic001G263300 Sobic004G248500--Sobic001G263300 Sobic005G115300--Sobic001G503000 Sobic005G115300--Sobic004G312200 Sobic005G115300--Sobic004G248500 Sobic005G115300--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic005G115300--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic005G115300--Sobic010G096700 Sobic010G082000 Sobic010G082000 Sobic005G115300--Sobic010G082000 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic010G192432 Sobic010G192432 Sobic010G192366--Sobic010G192432 Sobic010G192366--Sobic010G097200 Sobic001G483600 Sobic001G483600 Sobic010G192366--Sobic001G483600 Sobic004G119800 Sobic004G119800 Sobic010G192366--Sobic004G119800 Sobic008G037900 Sobic008G037900 Sobic010G192366--Sobic008G037900 Sobic006G196400 Sobic006G196400 Sobic010G192366--Sobic006G196400 Sobic005G080600 Sobic005G080600 Sobic010G192366--Sobic005G080600 Sobic006G135300 Sobic006G135300 Sobic010G192366--Sobic006G135300 Sobic007G100700 Sobic007G100700 Sobic010G192366--Sobic007G100700 Sobic003G269900 Sobic003G269900 Sobic007G167400--Sobic003G269900 Sobic007G167400--Sobic010G192366 Sobic010G139100 Sobic010G139100 Sobic007G167400--Sobic010G139100 Sobic003G185300 Sobic003G185300 Sobic007G167400--Sobic003G185300 Sobic007G167400--Sobic005G110490 Sobic002G118900 Sobic002G118900 Sobic007G167400--Sobic002G118900 Sobic006G171300 Sobic006G171300 Sobic007G167400--Sobic006G171300 Sobic009G032900 Sobic009G032900 Sobic007G167400--Sobic009G032900 Sobic010G115000 Sobic010G115000 Sobic007G167400--Sobic010G115000 Sobic004G312200--Sobic005G115300 Sobic004G312200--Sobic001G503000 Sobic004G312200--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic004G312200--Sobic005G175900 Sobic004G312200--Sobic010G082000 Sobic004G312200--Sobic003G185300 Sobic004G312200--Sobic001G263300 Sobic004G312200--Sobic003G215300 Sobic001G149400 Sobic001G149400 Sobic004G312200--Sobic001G149400 Sobic001G360500 Sobic001G360500 Sobic002G318200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic002G318200--Sobic003G203600 Sobic002G318200--Sobic006G183900 Sobic002G216100 Sobic002G216100 Sobic002G318200--Sobic002G216100 Sobic005G046700 Sobic005G046700 Sobic002G318200--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic002G318200--Sobic007G165400 Sobic002G318200--Sobic006G229100 Sobic002G404100 Sobic002G404100 Sobic002G318200--Sobic002G404100 Sobic004G139300 Sobic004G139300 Sobic002G318200--Sobic004G139300
Octagon: transcription factors


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