Gene annotation
Transcriptome id Sobic.001G294400.2,Sobic.001G294400.1
Synonym SRK2E, ATOST1, Sb01g028760, SNRK2.6, P44, OST1, SNRK2-6
Functional annotation CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5S8G9 , A0A1B6QLV2
Pfam PF00069 PF07714
Panther DB PTHR24343:SF207 PTHR24343 PTHR24343 PTHR24343:SF207
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G33950 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g41490.1 : CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a038354 , Zm00025a003410
Brachypodium KQK13038 , KQK13039 , KQJ97847
Barley HORVU1Hr1G055340.25 , HORVU1Hr1G055340.24 , HORVU1Hr1G055340.27 , HORVU1Hr1G055340.20 , HORVU1Hr1G055340.23 , HORVU1Hr1G055340.22 , HORVU5Hr1G097630.21 , HORVU5Hr1G097630.20 , HORVU5Hr1G097630.9 , HORVU5Hr1G097630.1 , HORVU5Hr1G097630.6 , HORVU5Hr1G097630.7 , HORVU5Hr1G097630.15 , HORVU5Hr1G097630.19 , HORVU1Hr1G055340.8 , HORVU1Hr1G055340.9 , HORVU1Hr1G055340.2 , HORVU1Hr1G055340.3 , HORVU1Hr1G055340.1 , HORVU1Hr1G055340.6 , HORVU1Hr1G055340.7 , HORVU1Hr1G055340.4 , HORVU1Hr1G055340.5 , HORVU1Hr1G055340.18 , HORVU1Hr1G055340.19 , HORVU1Hr1G055340.10 , HORVU1Hr1G055340.11 , HORVU1Hr1G055340.12 , HORVU1Hr1G055340.13 , HORVU1Hr1G055340.14 , HORVU1Hr1G055340.15 , HORVU1Hr1G055340.16 , HORVU1Hr1G055340.17 , HORVU1Hr1G055340.29 , HORVU1Hr1G055340.26 , HORVU1Hr1G055340.21
Wheat TraesCS5A02G401700 , TraesCS1D02G218200 , TraesCS1B02G229400 , TraesCS5B02G406400 , TraesCS1A02G215900 , TraesCS5D02G411900 , TraesCS5D02G411900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
3 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
4 Sobic.001G084100 UDP-glucose 6-dehydrogenase 5(PubMedID : 26186930)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
5 Sobic.010G071400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
7 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
8 Sobic.005G142300 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
9 Sobic.009G102600 DUF640 domain containing protein, putative, expressed -
10 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
11 Sobic.009G220200 exostosin family domain containing protein, expressed -
12 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
13 Sobic.003G219800 transferase family protein, putative, expressed -
14 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
15 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
16 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.003G119500 expressed protein -
18 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
19 Sobic.003G290000 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
20 Sobic.002G361700 expressed protein -


Gene co-expression network
sample Sobic001G294400 Sobic001G294400 Sobic006G242100 Sobic006G242100 Sobic001G294400--Sobic006G242100 Sobic004G212300 Sobic004G212300 Sobic001G294400--Sobic004G212300 Sobic010G069900 Sobic010G069900 Sobic001G294400--Sobic010G069900 Sobic001G084100 Sobic001G084100 Sobic001G294400--Sobic001G084100 Sobic010G071400 Sobic010G071400 Sobic001G294400--Sobic010G071400 Sobic010G052200 Sobic010G052200 Sobic001G294400--Sobic010G052200 Sobic004G172100 Sobic004G172100 Sobic001G294400--Sobic004G172100 Sobic005G142300 Sobic005G142300 Sobic001G294400--Sobic005G142300 Sobic009G102600 Sobic009G102600 Sobic001G294400--Sobic009G102600 Sobic006G242100--Sobic004G172100 Sobic006G242100--Sobic001G294400 Sobic003G095400 Sobic003G095400 Sobic006G242100--Sobic003G095400 Sobic002G372800 Sobic002G372800 Sobic006G242100--Sobic002G372800 Sobic003G353400 Sobic003G353400 Sobic006G242100--Sobic003G353400 Sobic004G111100 Sobic004G111100 Sobic006G242100--Sobic004G111100 Sobic001G038200 Sobic001G038200 Sobic006G242100--Sobic001G038200 Sobic009G194200 Sobic009G194200 Sobic006G242100--Sobic009G194200 Sobic009G220200 Sobic009G220200 Sobic006G242100--Sobic009G220200 Sobic004G212300--Sobic010G052200 Sobic001G532200 Sobic001G532200 Sobic004G212300--Sobic001G532200 Sobic003G119500 Sobic003G119500 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic004G212300--Sobic001G084100 Sobic001G516600 Sobic001G516600 Sobic004G212300--Sobic001G516600 Sobic006G156000 Sobic006G156000 Sobic004G212300--Sobic006G156000 Sobic002G040600 Sobic002G040600 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic003G227700 Sobic003G227700 Sobic010G069900--Sobic003G227700 Sobic010G069900--Sobic010G071400 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic001G006201 Sobic001G006201 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic001G084100--Sobic001G532200 Sobic001G173300 Sobic001G173300 Sobic001G084100--Sobic001G173300 Sobic001G084100--Sobic006G156000 Sobic001G084100--Sobic010G052200 Sobic005G168100 Sobic005G168100 Sobic001G084100--Sobic005G168100 Sobic001G084100--Sobic004G212300 Sobic001G084100--Sobic003G119500 Sobic003G219800 Sobic003G219800 Sobic001G084100--Sobic003G219800 Sobic001G418100 Sobic001G418100 Sobic001G084100--Sobic001G418100 Sobic006G274933 Sobic006G274933 Sobic010G071400--Sobic006G274933 Sobic010G071400--Sobic003G227700 Sobic002G183700 Sobic002G183700 Sobic010G071400--Sobic002G183700 Sobic010G071400--Sobic003G119500 Sobic004G029100 Sobic004G029100 Sobic010G071400--Sobic004G029100 Sobic004G322100 Sobic004G322100 Sobic010G071400--Sobic004G322100 Sobic003G140700 Sobic003G140700 Sobic010G071400--Sobic003G140700 Sobic008G019800 Sobic008G019800 Sobic010G071400--Sobic008G019800 Sobic006G256900 Sobic006G256900 Sobic010G071400--Sobic006G256900 Sobic010G052200--Sobic004G212300 Sobic010G052200--Sobic001G084100 Sobic010G052200--Sobic001G532200 Sobic002G128800 Sobic002G128800 Sobic010G052200--Sobic002G128800 Sobic007G124301 Sobic007G124301 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic003G037800 Sobic003G037800 Sobic010G052200--Sobic003G037800 Sobic005G113300 Sobic005G113300 Sobic010G052200--Sobic005G113300 Sobic010G052200--Sobic006G156000 Sobic004G172100--Sobic006G242100 Sobic004G172100--Sobic003G095400 Sobic009G030200 Sobic009G030200 Sobic004G172100--Sobic009G030200 Sobic006G087900 Sobic006G087900 Sobic004G172100--Sobic006G087900 Sobic004G172100--Sobic009G102600 Sobic003G278700 Sobic003G278700 Sobic004G172100--Sobic003G278700 Sobic009G099000 Sobic009G099000 Sobic004G172100--Sobic009G099000 Sobic004G257800 Sobic004G257800 Sobic004G172100--Sobic004G257800 Sobic004G172100--Sobic001G294400 Sobic004G042000 Sobic004G042000 Sobic005G142300--Sobic004G042000 Sobic001G111000 Sobic001G111000 Sobic005G142300--Sobic001G111000 Sobic005G142300--Sobic003G119500 Sobic005G142300--Sobic004G212300 Sobic005G142300--Sobic010G052200 Sobic003G311800 Sobic003G311800 Sobic005G142300--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic005G142300--Sobic009G109000 Sobic009G232100 Sobic009G232100 Sobic005G142300--Sobic009G232100 Sobic010G028200 Sobic010G028200 Sobic005G142300--Sobic010G028200 Sobic009G102600--Sobic010G069900 Sobic009G102600--Sobic004G172100 Sobic009G102600--Sobic004G212300 Sobic009G102600--Sobic002G040600 Sobic009G102600--Sobic001G294400 Sobic009G102600--Sobic010G192432 Sobic010G192366 Sobic010G192366 Sobic009G102600--Sobic010G192366 Sobic009G102600--Sobic003G095400 Sobic003G129400 Sobic003G129400 Sobic009G102600--Sobic003G129400
Octagon: transcription factors


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