Gene annotation
Transcriptome id Sobic.002G361700.1
Synonym Sb02g038190
Functional annotation expressed protein
UniProt A0A1B6QFB0
Pfam -
Panther DB PTHR28498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33925 : -
RAP-DB (Rice) LOC_Os07g40310.1 : expressed protein
MaizeGDB (Corn) Zm00025a048628
Brachypodium KQK15442
Barley HORVU2Hr1G034660.3 , HORVU2Hr1G034660.2 , HORVU2Hr1G034660.1 , HORVU2Hr1G034660.7 , HORVU2Hr1G034660.6 , HORVU2Hr1G034660.5 , HORVU2Hr1G034660.4 , HORVU2Hr1G034660.9 , HORVU2Hr1G034660.8
Wheat TraesCS2A02G183700 , TraesCS2D02G191600 , TraesCS2B02G210400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
2 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
5 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
7 Sobic.003G219800 transferase family protein, putative, expressed -
8 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
9 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
10 Sobic.001G304400 expressed protein -
11 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
12 Sobic.003G119500 expressed protein -
13 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
14 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
15 Sobic.006G282300 - -
16 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
17 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
18 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
19 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
20 Sobic.001G432000 LYR motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G361700 Sobic002G361700 Sobic006G156000 Sobic006G156000 Sobic002G361700--Sobic006G156000 Sobic001G418900 Sobic001G418900 Sobic002G361700--Sobic001G418900 Sobic004G212300 Sobic004G212300 Sobic002G361700--Sobic004G212300 Sobic002G257300 Sobic002G257300 Sobic002G361700--Sobic002G257300 Sobic003G443300 Sobic003G443300 Sobic002G361700--Sobic003G443300 Sobic009G238900 Sobic009G238900 Sobic002G361700--Sobic009G238900 Sobic003G219800 Sobic003G219800 Sobic002G361700--Sobic003G219800 Sobic004G138800 Sobic004G138800 Sobic002G361700--Sobic004G138800 Sobic001G505500 Sobic001G505500 Sobic002G361700--Sobic001G505500 Sobic006G156000--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic006G156000--Sobic001G432000 Sobic005G168100 Sobic005G168100 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic001G084100 Sobic001G084100 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic009G212200 Sobic009G212200 Sobic006G156000--Sobic009G212200 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic007G115100 Sobic007G115100 Sobic001G418900--Sobic007G115100 Sobic001G418900--Sobic003G443300 Sobic001G418900--Sobic004G138800 Sobic004G310300 Sobic004G310300 Sobic001G418900--Sobic004G310300 Sobic001G418900--Sobic002G257300 Sobic009G119900 Sobic009G119900 Sobic001G418900--Sobic009G119900 Sobic003G155400 Sobic003G155400 Sobic001G418900--Sobic003G155400 Sobic005G188100 Sobic005G188100 Sobic001G418900--Sobic005G188100 Sobic005G110800 Sobic005G110800 Sobic001G418900--Sobic005G110800 Sobic010G052200 Sobic010G052200 Sobic004G212300--Sobic010G052200 Sobic001G532200 Sobic001G532200 Sobic004G212300--Sobic001G532200 Sobic003G119500 Sobic003G119500 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic004G212300--Sobic001G084100 Sobic001G516600 Sobic001G516600 Sobic004G212300--Sobic001G516600 Sobic004G212300--Sobic006G156000 Sobic002G040600 Sobic002G040600 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic002G398901 Sobic002G398901 Sobic002G257300--Sobic002G398901 Sobic002G257300--Sobic001G418900 Sobic002G190900 Sobic002G190900 Sobic002G257300--Sobic002G190900 Sobic003G209000 Sobic003G209000 Sobic002G257300--Sobic003G209000 Sobic004G051700 Sobic004G051700 Sobic002G257300--Sobic004G051700 Sobic010G239500 Sobic010G239500 Sobic002G257300--Sobic010G239500 Sobic002G418400 Sobic002G418400 Sobic002G257300--Sobic002G418400 Sobic002G257300--Sobic009G119900 Sobic003G363800 Sobic003G363800 Sobic002G257300--Sobic003G363800 Sobic003G443300--Sobic001G304400 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic006G216600 Sobic006G216600 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800 Sobic009G238900--Sobic003G219800 Sobic001G444800 Sobic001G444800 Sobic009G238900--Sobic001G444800 Sobic005G112800 Sobic005G112800 Sobic009G238900--Sobic005G112800 Sobic006G035900 Sobic006G035900 Sobic009G238900--Sobic006G035900 Sobic009G238900--Sobic001G040100 Sobic001G418100 Sobic001G418100 Sobic009G238900--Sobic001G418100 Sobic009G238900--Sobic002G361700 Sobic009G238900--Sobic003G443300 Sobic001G514200 Sobic001G514200 Sobic009G238900--Sobic001G514200 Sobic003G219800--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic003G219800--Sobic009G181800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic003G219800--Sobic009G238900 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic004G138800--Sobic001G505500 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic001G505500--Sobic004G138800 Sobic001G505500--Sobic001G418900 Sobic001G505500--Sobic007G115100 Sobic001G505500--Sobic007G076300 Sobic007G092100 Sobic007G092100 Sobic001G505500--Sobic007G092100 Sobic001G334300 Sobic001G334300 Sobic001G505500--Sobic001G334300 Sobic001G018800 Sobic001G018800 Sobic001G505500--Sobic001G018800 Sobic009G227400 Sobic009G227400 Sobic001G505500--Sobic009G227400 Sobic001G513500 Sobic001G513500 Sobic001G505500--Sobic001G513500
Octagon: transcription factors


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