Gene annotation
Transcriptome id Sobic.010G071400.1
Synonym Sb10g006240
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z5Y1
Pfam -
Panther DB PTHR34206 PTHR34206:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14280 : -
RAP-DB (Rice) LOC_Os06g09350.1 : expressed protein
MaizeGDB (Corn) Zm00025a042433
Brachypodium KQK19171 , KQK19170 , PNT76280 , PNT76279
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274933 - -
2 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
3 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
4 Sobic.003G119500 expressed protein -
5 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
6 Sobic.004G322100 hypro1, putative, expressed -
7 Sobic.003G140700 peroxidase precursor, putative, expressed -
8 Sobic.008G019800 - -
9 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
10 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.001G438200 expressed protein -
13 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.010G148800 WRKY31, expressed -
15 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
16 Sobic.007G158800 patatin, putative, expressed -
17 Sobic.001G430100 - -
18 Sobic.009G002400 polygalacturonase inhibitor precursor, putative, expressed -
19 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
20 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic010G071400 Sobic010G071400 Sobic006G274933 Sobic006G274933 Sobic010G071400--Sobic006G274933 Sobic003G227700 Sobic003G227700 Sobic010G071400--Sobic003G227700 Sobic002G183700 Sobic002G183700 Sobic010G071400--Sobic002G183700 Sobic003G119500 Sobic003G119500 Sobic010G071400--Sobic003G119500 Sobic004G029100 Sobic004G029100 Sobic010G071400--Sobic004G029100 Sobic004G322100 Sobic004G322100 Sobic010G071400--Sobic004G322100 Sobic003G140700 Sobic003G140700 Sobic010G071400--Sobic003G140700 Sobic008G019800 Sobic008G019800 Sobic010G071400--Sobic008G019800 Sobic006G256900 Sobic006G256900 Sobic010G071400--Sobic006G256900 Sobic006G274933--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic006G274933--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic006G274933--Sobic003G269600 Sobic006G274933--Sobic003G140700 Sobic002G361200 Sobic002G361200 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G225500 Sobic006G225500 Sobic006G274933--Sobic006G225500 Sobic003G121100 Sobic003G121100 Sobic006G274933--Sobic003G121100 Sobic010G069900 Sobic010G069900 Sobic003G227700--Sobic010G069900 Sobic003G257400 Sobic003G257400 Sobic003G227700--Sobic003G257400 Sobic003G227700--Sobic010G071400 Sobic006G003100 Sobic006G003100 Sobic003G227700--Sobic006G003100 Sobic001G006201 Sobic001G006201 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic002G183700--Sobic003G311800 Sobic010G212500 Sobic010G212500 Sobic003G119500--Sobic010G212500 Sobic003G119500--Sobic003G311800 Sobic002G003800 Sobic002G003800 Sobic003G119500--Sobic002G003800 Sobic009G109000 Sobic009G109000 Sobic003G119500--Sobic009G109000 Sobic001G049900 Sobic001G049900 Sobic003G119500--Sobic001G049900 Sobic003G119500--Sobic006G274933 Sobic004G348800 Sobic004G348800 Sobic003G119500--Sobic004G348800 Sobic004G297900 Sobic004G297900 Sobic003G119500--Sobic004G297900 Sobic010G085800 Sobic010G085800 Sobic003G119500--Sobic010G085800 Sobic004G029100--Sobic004G322100 Sobic004G029100--Sobic002G183700 Sobic004G029100--Sobic010G152400 Sobic004G029100--Sobic007G158800 Sobic004G029100--Sobic003G000100 Sobic007G008600 Sobic007G008600 Sobic004G029100--Sobic007G008600 Sobic004G029100--Sobic001G502000 Sobic003G182200 Sobic003G182200 Sobic004G029100--Sobic003G182200 Sobic004G029100--Sobic008G019800 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G306900 Sobic004G306900 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic002G255000 Sobic002G255000 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic001G229000 Sobic001G229000 Sobic008G019800--Sobic001G229000 Sobic008G019800--Sobic001G438200 Sobic008G019800--Sobic010G152400 Sobic008G019800--Sobic004G029100 Sobic008G019800--Sobic001G502000 Sobic008G019800--Sobic004G322100 Sobic008G019800--Sobic007G158800 Sobic008G019800--Sobic002G183700 Sobic008G019800--Sobic004G306900 Sobic010G148800 Sobic010G148800 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic006G256900--Sobic003G140700 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300
Octagon: transcription factors


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